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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig27485  (registered. 2012)
Contig Information
Length 971 bp
Clones alternative view 134 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 1
Wh_dL Crown of seedling 5
Wh_f Spike at flowering date 2
Wh_oh Pistil at heading date 3
Wh_r Root 2
Wh_yd Spikelet at late flowering 2
Wh_CSEC Callus 5
Wh_EM Dormant seed with water absorption 1
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 2
Wh_KMP Shoot grown under continuous light 2
Wh_KMV Shoot grown with continuous light after cold treatment 1
Wh_MS Seed DPA5 of DT3DL CS wheat 2
Wh_PCDAM Anther at meiosis 2
Wh_SHC Shoot grown with cold treatment 1
Wh_V4816 Shoot grown under cold condition for 16days 4
Wh_VSCB Liquid cultured tissue 3
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 10
WH_XJ Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 12
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 5
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 4
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 5
WH_XN Leaves, plant was grown at constant 23Ž 3
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 2
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 7
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 1
WH_XR Roots, 18 day old plants were grown hydroponically 3
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 2
WH_XT Roots, 18 day old plants were grown hydroponically 2
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 2
WH_SP 3
WH_XA Root 2
WH_XC Root, treated at 50 microM Al for 6h 13
WH_XD Root, treated at 50 microM Al for 6h 4
WH_XE Seedling, infected with leaf rust 7
WH_XF Seedling, infected with leaf rust 5
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 2
WH_XV Leaves, plant was grown at constant 23Ž 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|296083584|emb|CBI23573.3|| unnamed protein product [Vitis vinifera]
Score 267
Evalue 2.00E-69
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig27485 
CACCCTCTTCCGTCGCCGTCGATTCGAACCTCCCCCAAATCAGCAGCAGTCGACCGGAGGCGCCGCCATGGCCCGTACCAAGCAGACCGCCCGCAAGTCC
ACCGGCGGCAAGGCGCCCCGCAAGCAGCTCGCCACCAAGGCGGCGAGGAAGTCGGCGCCGACCACCGGCGGAGTGAAGAAACCCCACCGCTACAGGCCGG
GGACCGTGGCGCTCCGGGAGATCCGCAAGTACCAGAAGAGCACGGAGCTGCTGATCCGCAAGCTGCCTTTCCAGCGCCTGGTCCGCGAGATCGCGCAGGA
CTTCAAGACGGACCTCCGCTTCCAGTCCCACGCCGTGCTGGCCCTCCAGGAGGCGGCCGAGGCGTACCTCGTCGGGCTGTTCGAGGACACCAACCTGTGC
GCCATCCACGCCAAGCGCGTCACCATCATGCCCAAGGACATCCAGCTCGCCCGCCGCATCCGTGGCGAGAGGGCCTAAGCTGTCCTCTCCGTGAACGACG
GTAGTGGATCGGGATGAGTTGATTCCGGTTGTAGTTTGTTCCTAATTGCTGTTCTAGGTCTTAAGCTTTTGTGTAGAAGAAATATGGTTGTTAGGTATGA
GTAAGACGAACCAACTTGATATGTGATGTTCCTTTTGGTTTGCGATGAAGCAAACGTATGTCTATGTTGAAGACCTCAGAACCATTGTTGTTCGCTGCAA
AAAAAAAATTGTCGTGCCCTTGATCCCATCGTGGTATTGTATCAAAAAAACCAATGGAGCAACGACACCGTGAAAGAAGACAACGTTTGCTCAAGTCACA
GGCTGATACAGCATTCAAGCTGAAGGAGTATAAGATGGCATCAGAGTGTTATGGTCTGGCAATAGATCATGGAGAGAGTGCAACACTGTATGCAAACAGG
AGTGTTTGTAAACTGCTCATGGGTGATGGTGAAGGTGCTTTGTCAGATGCTCTCAGGTGCAGAATGCTGCG
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