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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig6772  (registered. 2012)
Contig Information
Length 1250 bp
Clones alternative view 22 Clones [Download: TSV  ,  FASTA ]
Wh_f Spike at flowering date 1
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 1
Wh_KMV Shoot grown with continuous light after cold treatment 1
Wh_OKCS Seed DPA5 1
Wh_V4816 Shoot grown under cold condition for 16days 1
Wh_V483 Shoot grown under cold condition for 3days 2
Wh_VHS Shoot with heat shock treatment 2
WH_XJ Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 2
WH_XN Leaves, plant was grown at constant 23℃ 1
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23℃ ) 1
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27℃ ) 1
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 2
WH_XT Roots, 18 day old plants were grown hydroponically 2
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 2
WH_XC Root, treated at 50 microM Al for 6h 1
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|226496669|ref|NP_001143740.1|| hypothetical protein LOC100276494 [Zea mays]
Score 422
Evalue 3.00E-116
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig6772 
AGACAGCCCGACCCGCTCCTCAGCTCACCTCACGCCGTAACCTAAGCTAGGTTTTCCTCCTCCACCTCCACCGGCATCACCTCGGACGCGCGGCGGCGTG
CAGCCATGGCGATGGTGGCACAGGCGGGCTTCGGCCTCACCCGCGTCGTCATGCTCGTCGGCGCGGGCGTGGCCGGCTCCGTCGTCCTACGAAACGGCCG
CCTCTCGGAGATCCTCACCGAGATACAGGAGTTTCTGGAGAAGGGGGAGATGGGTAAGGGAGGAGGTGGTGGTGCGGACCACGGCATCAACGACGCGCTC
AACGAGGTGCGCCAACTTGCTATGCAGGTACGCAATCTAGGTTCTCCACGTTCGATAACTGTTCTCAGTGGAGGTTCTGGACAAACAGGAGTATCAGGAC
TAATAGTACCTGCAGCAACTGTTGGAGCACTGGGTTATGGTTATATGTGGTGGAAAGGCATCTCCTTTGGGGACTTAATGTATGTCACCAAGCAAAACAT
GGCAAACGTTGTTTCCAGTATGACTAAACATCTGGAGCAAGTTCAGAGCTCTCTTGCTGCTGCTAAAAAGCATTTGACACAACGCATTGAGAAGTTGGAT
GACAAATTGGATCAGCAGAAGGCGCTTTCTGGGCAAATAAAAGATGATGTTACTGGCGCACGACTGAAGCTTGAGAATATTGGTTCAGAGATTAAGAACA
TCAAAGAATTGGTCTGGGGACTGGATGAGAAGATGGATTCAATGGAAGCCAAACAGAATTTTTCATGCGCTGGTGTGATGTACCTCTGCCAATTCATAGA
GCAAAGTGGTGGGAAGCTCCCTGAACGCCTGGAAGGCATTAAACCATCAGCGAAGCGATTTGAAACAATTGGCATACAGGGGTTGCAACTAGCCATAGAA
ACAGGGAATTTTAGTGATTTCAGCAATTCTGATTCCACTGACAAGATAAGCAGGTCCAACTCGTTGAAGTCTGCCAACTAATTTTCTTCGGGGTTGGCGA
GACATGTATCCAGATTCGTTACTTAGTGGAACATTGTAAAGGGAGATCCTTGCTGGATAAAATGTAAAGAGTCCCAGCCTTTTTGTTATTTGCTTGTAGG
AAGTGCTGTTTGTTAAATTTGAAAACGTGTGCGAAGTAGTAGCTACTATGGAATCTAGACCAGATGTTATTCTGGCATCACTTATGCCTTGCATTTTTAT
GCAATACTTGCCGTAAATAAATGGACGACACTTCAGTTTCAAAAAAAAAA
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