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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig16287  (registered. 2002)
Contig Information
Length 991 bp
Clones 227 Clones [Download: TSV  ,  FASTA ]
Wh Spike at meiosis 16
Wh_SL Seed DPA30 33
Wh_dL Crown of seedling 14
Wh_e Seed DPA10 2
Wh_f Spike at flowering date 28
Wh_h Spike at heading date 38
Wh_oh Pistil at heading date 23
Wh_r Root 22
Wh_yd Spikelet at late flowering 36
Wh_yf Spikelet at early flowering 15
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit cyclophilin A-1 [Triticum aestivum] >gi|13925737|gb|AAK49428.1|AF262984_1 cyclophilin A-3 [Triticum aestivum] >gi|156193317|gb|ABU56010.1| cyclophilin 5 [Dasypyrum villosum]
Score 517
Evalue 4.33484e-79
Total Hit Count 500
Registered year 2002
Contig Sequence     [ Download ]
>Contig16287 
caCTAGAAAAAGCACACGGGCTCCAACACATTGGAGTCAGGAGCACCAGACAAAGAAAGAACGCGACAAACAGGTACTGAATCCAACGAG*CACAAATTA
CGGATAATTCATAGCGGAGTTCATCTCATTCAAACGGTAAGATAGCAGCAG*ACACAGG*AAGATAAC*CAAGG*CCGCCGG*ACGCAG*ATCCAGCGGC
CCAAAG*AGTCCACCTAA*AACCCTCCT*AAACCAACCACGG*A**G*ATCTCATCGGACGGACCA*GGGG*AAG*ACACGACACACG*ACTCTCTTATT
TAGATCGACGACACGACACGGG*ACACACGGGG*CGATGACGACGACGGCGACCGGCGGGCGGGCGGATCTAGAGCTGGCCGCAGTCGGCGATGACGACC
TGCTTGGAGCAGGTGCCGCTGCGGGAGCCCACCTTCT*CGATGTTCTTGACGACGT*CCATGCCCTC*GACGACCTCGCCGAAGACCACGTGCTT*GCCG
TCGAGCCAATTGCAGGGGACGGTGCAGATGAAGAACTGGGAGCCGTT*GGTGTTGGGCCCCGGCGTTGGCCATGGAGAGGATCCCGGGCTTGGTGTGCTT
GTGGACGAACTT*CTCGTCGGCGAACTTCT*CGCCGTAGATGGACTCGCCT*CCGG*TGCCGTTGCCCCTGGT*GAAG*TCGCCGCCCTGGCACAT*GAA
GTCGGGGATCAC*GCGGTGGAAGGCGCTGCCCTT*GTAGTGCAGCGG*CTT*GCCGCTCTTGCCGACGCCCTTCTCGCC*GGTGCAGAGC*GCGC*GGAA
GTTCTCCACCGT*CCGCGGCACCGCGTCCTTGTACAGCTCCATCACGATGCGCCCCGCCGGCGCGCCGCCGACGG*TCATGTCGAAGAACACCCT*CGG*
GTTG*GCCAT*CTCGCTCGCCGGGCATCGGGGATGAGGG*CTAGGGTTTTGAGATGGGGATTTACTGTGCGGATTGGATCctcgtgccgaa
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