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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

MUGEST2003_all.Contig24937  (registered. 2003)
Contig Information
Length 1984 bp
Clones 48 Clones [Download: TSV  ,  FASTA ]
Wh_CSEC Callus 6
Wh_DPA20 Seed DPA20 2
Wh_EM Dormant seed with water absorption 2
Wh_EMI Dormant seed with water absorption after breaking 1
Wh_GCPCDAM Anther at meiosis of DT4B CS wheat 1
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 5
Wh_KMP Shoot grown under continuous light 4
Wh_KMV Shoot grown with continuous light after cold treatment 3
Wh_MS Seed DPA5 of DT3DL CS wheat 1
Wh_OKCS Seed DPA5 2
Wh_PCDAM Anther at meiosis 1
Wh_RDr Root of dessiccated seed 2
Wh_SHC Shoot grown with cold treatment 2
Wh_V4816 Shoot grown under cold condition for 16days 2
Wh_V483 Shoot grown under cold condition for 3days 3
Wh_VABA Shoot with ABA treatment 1
Wh_VHS Shoot with heat shock treatment 6
Wh_VSCB Liquid cultured tissue 1
Wh_VWD Shoot grown with dessication 3
Homology (BLAST) Top Hit Os01g0817700 [Oryza sativa (japonica cultivar-group)] >gi|56201892|dbj|BAD73342.1| putative phosphoglycerate mutase [Oryza sativa Japonica Group] >gi|56785335|dbj|BAD82294.1| putative phosphoglycerate mutase [Oryza sativa Japonica Group] >gi|113534156|dbj|BAF06539.1| Os01g0817700 [Oryza sativa (japonica cultivar-group)] >gi|215694351|dbj|BAG89344.1| unnamed protein product [Oryza sativa Japonica Group]
Score 2660
Evalue 0
Total Hit Count 500
Registered year 2003
Contig Sequence     [ Download ]
>MUGEST2003_all.Contig24937 
GCTCGCTCTCCAAAGTTCTTCTTGTTCCGCAAACCACACGAAGAAAAAAAAGCAAAGGAGATGGCGACCACGAATTGGACGCTCCCCGACCACCCCACGC
TCCCCAAGGGGAAGACGGTGGCCGTCGTCGTGCTCGACGGATGGGGCGAGGCCAGCCCCGACCAGTACAACTGCATCCATGTCGCCCAGACGCCCGTCAT
GGATTCGCTCAAGAATGGTGCTCCTGAGAAGTGGAGACTAGTGAAGGCTCATGGAACTGCCGTTGGTCTCCCAAGTGACGACGACATGGGCAACAGTGAA
GTTGGCCACAATGCTCTTGGAGCTGGCCGAATCTTTGCTCAAGGTGCGAAGCTTGTTGATGCTGCTCTTGCTTCCGGGAAGATTTGGGAAGACGAGGGGT
TCAATTACATCAAGGAATCTTTTGATAAGGGTACTCTGCACCTTATTGGTTTGTTGAGTGATGGAGGCGTTCACTCCCGGCTAGACCAAGTGCAGTTGAT
TGTGAAAGGTGCCAGTGAGAGGGGAGCAAAAAGAATTCGCCTTCACATTCTTACTGATGGGCGTGATGTTTTGGATGGCAGTAGTGTTGGTTTCGTAGAG
ACAATTGAGAACGATCTTGCTCAGCTTCGTGAGCAGGGTGTTGATGCACGGATTGCATCTGGTGGTGGAAGGATGTATGTTACCATGGACCGCTACGAGA
ATGACTGGAGTGTGGTCAAGCGTGGGTGGGATGCCCAGGTACTTGGAGAAGCACCACACAAATTCCAAAATGCACTTGAAGCTGTGAAGACTCTAAGAGC
AGAGCCCAAGGCCAATGATCAGTATTTGCCTCCCTTTGTGATTGTTGATGAGAGTGGCAAATCGGTTGGTCCTATAGTAGACGGTGATGCTGTCGTGACT
TTCAATTTCAGAGCTGATCGCATGGTTATGCTTGCGAAAGCACTTGAGTTTCCTGATTTTGATAAATTTGACCGTGTTCGTGTACCAAAAATTAAGTACG
CTGGGATGCTTCAATATGATGGTGAGTTGAAGCTTCCAAGCAAGTACCTTGTTTCCCCACCTTTGATTGAGAGGACATCTGGTGAATACTTGGTGAAGAA
TGGTGTCCGCACCTTCGCTTGCAGTGAAACAGTTAAGTTTGGCCATGTCACATTTTTCTGGAATGGAAACCGTTCGGGATACTTTGACGAGACCAGGGAA
GAGTATGTAGAAATTCCCAGTGACAGTGGTATCACATTCAATGAGCAGCCCAAAATGAAGGCACTTGAAATTGCTGAGAGAACTCGGGATGCTATCCTCA
GTGGGAAGTTTGACCAGGTGCGTATTAACCTGCCAAACGGTGACATGGTTGGTCACACTGGTGATATTGAAGCCACAGTTGTTGCTTGCAAGGCTGCTGA
TGAAGCTGTCAAGATGGTCTTGGATGCTGTGGAGCAAGTTGGTGGTATCTATCTTGTCACAGCTGATCATGGAAACGCAGAGGATATGGTTAAGAGGAAC
AAAGCTGGCCAGCCGATGCTCGACAAGAGCGGCAGCATCCAGATTCTTACATCGCACACGCTTCAGCCAGTCCCTGTTGCTATCGGAGGCCCTGGTCTCC
ACCCAGGAGTGAGATTCCGCTCCGACATCCAGACACCCGGGCTCGCCAACGTCGCCGCCACCGTGATGAACCTCCATGGCTTCCAGGCTCCTGCTGATTA
CGAGACGACCCTCATCGAAGTCATTGACAAGTAAAAAAAAAAACACTGCGCCCTCTGAAGCCAAAATTGCTGCAGCCGATTTTGTCGCTATAGTTTTGGG
GTGGGTCAAGGAATGATCGCATCATTGAATAATTTGAGATTTGCCAGCACGCTTGCTCGAACTCATATGTAACATTGAGAAAGGTGGATTTTACTTGCAG
TTAGCTCTATTTTGTAATTTGGGGTATTGCCATGCTGGTTTGCTTAACATACCGATAGCGATTTTTGCTCAGCTAAAAAAAAAA
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