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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig8671  (registered. 2012)
Contig Information
Length 1159 bp
Clones alternative view 25 Clones [Download: TSV  ,  FASTA ]
Wh_dL Crown of seedling 1
Wh_e Seed DPA10 1
Wh_SHDr Shoot grown with dessication 2
WH_XJ Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 1
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23℃ ) 2
WH_XR Roots, 18 day old plants were grown hydroponically 2
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 1
WH_XT Roots, 18 day old plants were grown hydroponically 1
WH_XB Root 8
WH_XC Root, treated at 50 microM Al for 6h 1
WH_XD Root, treated at 50 microM Al for 6h 2
WH_XE Seedling, infected with leaf rust 1
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|222622588|gb|EEE56720.1|| hypothetical protein OsJ_06222 [Oryza sativa Japonica Group]
Score 462
Evalue 3.00E-128
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig8671 
TTTTTTTTTTGATCAGAAACTCTCTCCCCATAGCCTTGCTGGGCAGTGTTGTGATTTCTCAAAGAGAAAGAGGTCATTCCCCTGAAATGTGAATGTGCAA
ATTCACACTTCGACAAATATACAACATAAACTCTACTTACAACAGAACAACGATTACCATATTATAGTTACAACCACAAAAGTACGCCAAGACATTTATT
TTTCTTATTGTTGTATATCAGCCCAGGTAAAAAACTGGGAACATGATGTAATGTCCAACACACACTACAGGTAACACTTCCCTGGAGGTATTTTGAATAC
CACATATGTGCCGCAGGCAGTGTTGATGCTGTTTGAGAAGCCACTGTGCCAAGTGCTCGTCATATGCAGCGCCTCACATGCGTGACCTTGTCGAAGCTTG
GTGAGCCGTCCGTGGCGCGGCCAGTGGTCGGCCGCTTTTCGCTCTCTCCTCCAAATATGATGATGGTTTGAAGAAATCACCATACGCTTCAGCCCACTTG
CTAAGCTTTGAATGTATATAAGATGCTCCGACCGTGTCAGCCCAAAAGACGAGGCCACCCCTGTACTTGGGAAAGCCCATCCCGAGAACAGATGCAATAT
CAAGATCAGCAGCCCTGATCACCACATTTTCATCCATGACCCTGCATGCCTCATTAACGACTGGGAAGAAAACCATCTCCAATATATCTTGATCCGATAA
AGTAACAGGCTTTCCAGCCGGCATTGTCTTTGCCTGCTTTCTGTACTCATCAATCACAAGTTGAACATTAGGGTCAGGCTTTGGCTTCGCACCCTTCTCA
TAAAGGTAGTAACCTTTTCCATTGCTCTTTCCCTGCCGCCCAGTCTCTGCCATCAAATCCACTAGAACAGAGTTAAAATTCCGTGTTCCAAAGGCAGCTG
CATAGATATCCTTTACTGCTAAGGCTACTCCATATCCAGCTAAATCTTGGAGTTGAAAAGGTCCCATTGGCATGCCAAAGTTGCTTATTATTCGATCAAT
TCTGAAAAGATCAATGCCAAGACTAACTAGAAGCTGAGCACCTTGTGTGTAAGGGAAAAATGTACGATTTACTGCAAAGCCTGTGCAGTTGCCAACAACA
ACGGGGACTTTCCTTATTATTTTCCCAACTGTAATGAGATCGAGGATAGCTTGTGGTGA
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