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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

MUGEST2003_all.Contig24736  (registered. 2007)
Contig Information
Length 1626 bp
Clones 39 Clones [Download: TSV  ,  FASTA ]
Wh_DPA20 Seed DPA20 4
Wh_EM Dormant seed with water absorption 1
Wh_EMI Dormant seed with water absorption after breaking 2
Wh_GCPCDAM Anther at meiosis of DT4B CS wheat 2
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 2
Wh_KMP Shoot grown under continuous light 2
Wh_KMV Shoot grown with continuous light after cold treatment 2
Wh_MS Seed DPA5 of DT3DL CS wheat 5
Wh_OKCS Seed DPA5 2
Wh_RDr Root of dessiccated seed 8
Wh_SHDr Shoot grown with dessication 1
Wh_VABA Shoot with ABA treatment 5
Wh_VSCB Liquid cultured tissue 1
Wh_VWD Shoot grown with dessication 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit polyubiquitin [Zea mays] >gi|248339|gb|AAB21994.1| polyubiquitin [Zea mays] >gi|33323474|gb|AAQ07454.1| ubiquitin [Musa acuminata] >gi|52076878|dbj|BAD45891.1| polyubiquitin [Oryza sativa Japonica Group] >gi|218198760|gb|EEC81187.1| hypothetical protein OsI_24193 [Oryza sativa Indica Group]
Score 954
Evalue 0
Total Hit Count 500
Registered year 2007
Contig Sequence     [ Download ]
>MUGEST2003_all.Contig24736 
GTCAGGCGTGCCGTGGTCTCTCCTTCCTTCCCTCCCTCCCGTCCGAGCCTGCTATAAATTCCCCGTCCCCTCCCGTCTCCTCTCCACACATCCGATCCAA
TCCAATCCAGCCCCCCTCCGATCTCACCGAGAAATCGACGCGAAGGCTCTCTGCCCGTCCTCAAGATGCAGATCTTTGTGAAGACCCTCACCGGCAAGAC
CATCACCCTCGAGGTCGAGTCGTCGGACACCATCGACAATGTCAAGGCCAAAATCCAGGACAAGGAGGGCATCCCTCCGGACCAGCAGCGTCTCATCTTC
GCTGGCAAGCAGCTTGAGGATGGCCGCACCCTTGCTGACTACAACATCCAGAAGGAGTCCACCCTCCACCTGGTGCTCAGGCTCCGTGGTGGCATGCAGA
TTTTTGTGAAGACCCTCACCGGCAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACTATCGACAACGTCAAGGCTAAGATCCAGGACAAGGGAGGGCA
TCCCTCCGGACCAGCAGCGTCTCATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTTGCTGACTACAACATCCAGAAGGAGTCCACCCTCCACCT
GGTGCTCAGGCTCCGTGGTGGCATGCAGATTTTTGTGAAGACCCTCACCGGCAAGACCATCACCCTGGAGGTTGAGTCCTCGGACACCATCGACAACGTC
AAGGCGAAGATCCAGGACAAGGAGGGCATCCCCCCCGGACCAGCAGCGTCTCATCTTTGCTGGTAAGCAGCTTGAGGATGGCCGCACCCTGGCGGACTAT
AACATCCAGAAGGAGTCCACCCTTCACCTGGTGCTCAGGCTCAGGGGTGGGATGCAGATTTTTGTGAAGACCCTCACCGGCAAGACCATCACACTTGAGG
TCGAGTCCTCGGACACAATTGACAATGTGAAGGCTAAGATCCAGGACAAGGAAGGCATCCCTCCGGACCAGCAACGTCTCATCTTTGCTGGCAAGCAGCT
GGAGGATGGCCGCACCCTGGCTGACTACAACATCCAGAAGGAGTCCACCCTCCACCTGGTGCTCCGCCTTCGTGGGGGCATGCAAATCTTTGTCAAGACC
CTCACCGGCAAGACCATCACCCTGGAGGTTGAGTCCTCTGACACCATCGACAATGTGAAGGCGAAAATCCAGGACAAGGAGGGCATTCCCCCGGACCAGC
AGCGCCTGATCTTCGCTGGTAAGCAGCTTGAGGATGGCCGCACCCTGGCGGACTATAACATCCAGAAGGAGTCCACCCTTCACTTGGTGCTCCGTCTCCG
TGGTGGCCAGTAAGTGCCTGGCAATGGAGCGGCTTCTCTGTGGGTTGGGTTCACAGGTCTTGTGTCTTTGATATGTCCTCCAATGGTGCCTGTGTCTGTC
GTCCTGGTCGTTTCTATGTTTCTACCGTAGTGTGATGCATCGTTATGTTCGGTTGTTTTTGAGAATTGCTGGCTGTTGTGAACAGCTTTGGTGAACTTGA
TAAATAAGTGAGCCCTGAATTGTGTCTGCAGCTGCGAGTTATCCTGTGTTTTCTTTTGTTTCCTTCTATCTGATGCATTTCATCTCTATTCATATGAATA
TTGTACCTTGCATTTGTTAGTTCGAC
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