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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig17554  (registered. 2012)
Contig Information
Length 1393 bp
Clones alternative view 660 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 2
Wh_f Spike at flowering date 1
Wh_r Root 3
Wh_DPA20 Seed DPA20 2
Wh_RDr Root of dessiccated seed 9
Wh_SHC Shoot grown with cold treatment 6
Wh_SHDr Shoot grown with dessication 29
Wh_V4816 Shoot grown under cold condition for 16days 1
Wh_VABA Shoot with ABA treatment 1
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 1
WH_XJ Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 4
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 3
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 2
WH_XN Leaves, plant was grown at constant 23Ž 26
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 52
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 144
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 20
WH_XR Roots, 18 day old plants were grown hydroponically 36
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 20
WH_XT Roots, 18 day old plants were grown hydroponically 34
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 58
WH_SP 3
WH_XD Root, treated at 50 microM Al for 6h 10
WH_XE Seedling, infected with leaf rust 43
WH_XF Seedling, infected with leaf rust 18
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 26
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 64
WH_XV Leaves, plant was grown at constant 23Ž 10
WH_XW Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 11
WH_XX Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 13
WH_XY Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 8
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|170795|gb|AAA50850.1|| wali5 [Triticum aestivum]
Score 192
Evalue 8.00E-47
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig17554 
TTTTTTTTTTAACATGTGAACAATGGATATCATATCGGAGAGGATATAAATACAACGGGAAACATGTAACGCGTGGACAAGAGAACTTTTTTTTTTGCCA
CCAACGCACAATCATTACTTATTCACGGAGGATATTCCGGATATCTGAACAACAAGCAACACCAACTTTTTCTCGAGAGAGAAAACACAGCGACGAAGAC
ACGGCATACTGGTATACATATTTGTTGGCCACACACACACGCATAGGCACGATGACGCTGCTCATCTCGTCTGAGCTTTTATTTCATTTTAGGCGGAACA
TATCATGCTGGCATGAGCCGATCAGTACTTCTTGCAGGGCCCACCGCAGGTGCCGTCGACGGTGGATTTCATATCCGCGCAGCGCCACATTTCGGGGCTC
GTCGACACCACGCGGCACGCCGAGCAGCCCTTGGGGCACTTGGGGTGGGCGTCGTCGCAGACGTCGACCCCGGAGAAGGACCTGCAGTTGTTGCAGCACT
TGGGGAAATAGTCGGCGTTCACGTGTGAGAGGACTCCCATGACCAGGACGGCCTGGAGGATGAGGATCGCCGCGAGCTTGGTGCCCTTCATGGTCGCTGA
TGAACTTTTCGTGCAAAGCTCTCACTTCACTCGTGCGGTGCGGTGGTAGAATGCTCTCTGTTGTTGACGGTTAAGGGTAATGACTTCAAACATGGCCAGC
TCCTATAGTGTGACGGGCGGTGTGTACAAGGCCCGGGAACGGATTCACCGCCGTATGGCTGACCGGCGATTACTAGCGATTCCTGCTTCATGCAGGCGAG
TTGCAGCCTGCAATCCGAACTGAGGACGGGTTTTTGGAGTTAGCTCACCCTCGCGAGATCGCGACCCTTTGTCCCGCCCATTGTAGCACGTGTGTCGCCC
AGGGCATAAGGGGCATGATGACTTGGCCTCATCCTCTCCTTCCTCCGGCTTAACACCGGCGGTCTGTTCAGGGTTCCAAACTCATAGTGGCAACTAAACA
CGAGGGTTGCGCTCGTTGCGAGACTTAACCCAACACCTTACGGCACGAGCTGACGACAGCCATGCACCACCTGTGTCCGCGTTCCCGAGGGCACCCCTCT
CTTTCAAGAGGATTCGCGGCATGTCAAGCCCTGGTAAGGAAAATTGCACGCCAGCAGAAGGGAGTGACCGTCACCATCGAAGACGGCACGCAATACTCTG
CCGACGCCTGCATAATCACTGTGCCGCTCGGTGTGCTGAAGGCGAACATAATCAAGTTCGAGCCTGAGCTGCCCTCCTGGAAGAGCTCCGCCATCGCGGA
CCTCGGCGTCGGCATAGAAAACAAGGTCGCCATGCACTTCGACAAGGCCTTCTGGCCTAATGTCCAGGTGCTGGGCATGGTCGGCCCTACGCC
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