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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig24398  (registered. 2012)
Contig Information
Length 842 bp
Clones alternative view 16 Clones [Download: TSV  ,  FASTA ]
Wh_f Spike at flowering date 1
Wh_r Root 1
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 2
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23℃ ) 2
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 4
WH_XD Root, treated at 50 microM Al for 6h 5
WH_XW Leaves, seedling were infercted with blast strain Pr48 for 4 days (23℃ ) 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|226496727|ref|NP_001148701.1|| LOC100282317 [Zea mays]
Score 286
Evalue 3.00E-75
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig24398 
TCCGGAAAAACAGCGGGGGTGGAAGGAGGCCGGAAAGGCGCTGCCGCTTAGTCGTCGCCGTCGTCGTCCTCCTCTTCCTCCTGGTGGTGCTCGCGAGCTC
CAAGCCCTTGGCCGGTCGCGGGTAGGGTGACGAGTGAGATGGTTCGATCTCCGTCCGCAGCGGCGGCCGTCGCCGTGCTCCTCCTGTGCCTCTCCGGCCT
CTGCCGCGGCGCCGAGCGGCTCGGGGAGAGGGAGTGCGAGGAGCTGGGGTTCACCGGCCTCGCCCTCTGCTCCGACTGCAACGCGCTCGCCGAGTTCGTC
AAGGACCAAGAGTTAGTGGATGACTGTCGTAAATGTTGCACGGAGGATTCAGATGATTCTATCAGCAAGCTTGTATACTCCGGGGCAATTATCGAAGTAT
GCATGAGAAAGCTGGTGTTTTATCCCGAAGTTGTTGGCTTCCTTGAAGAGGATAAAGATAACTTCCCCTACGTAGAATCTCGGTATGCTTATGGCTCTCC
ACCAAAGCTCATAATGCTTGACGACAAGGGTGAACAGAAGGAGACTATAAGGATTGACAACTGGAAGCGTGAGCATATTCGGCAATTTCTCACAGAGAAG
GTGAAGCCGGCGAAATCAGAGACCTGAATACTCATGACAAGTTCCTCTCCCTGTAGAACCATATATCGATATGTGTATTTGTGTTCTTTTGCACGCAAAA
CCCCGGTCATCCATGATCTGTACCTAAAGAAGGTAACATGTGTACACTTCAACTGTTTTAACAAGACAACCTGTCATGTATGGAGTGCATTTGTTTTGTT
GTTGTAGACAGGCTGCTGGATCTGTTATCTACAAAAAAAAAA
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