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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig35124  (registered. 2012)
Contig Information
Length 2196 bp
Clones alternative view 103 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 2
Wh_dL Crown of seedling 2
Wh_r Root 1
Wh_KMP Shoot grown under continuous light 3
Wh_SHC Shoot grown with cold treatment 1
Wh_V4816 Shoot grown under cold condition for 16days 6
Wh_V483 Shoot grown under cold condition for 3days 2
Wh_VABA Shoot with ABA treatment 22
Wh_VWD Shoot grown with dessication 13
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 1
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 3
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 2
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 2
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 5
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 2
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 1
WH_XA Root 2
WH_XC Root, treated at 50 microM Al for 6h 2
WH_XD Root, treated at 50 microM Al for 6h 1
WH_XE Seedling, infected with leaf rust 20
WH_XF Seedling, infected with leaf rust 5
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 1
WH_XY Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 4
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|2565305|gb|AAB82711.1|| glycine decarboxylase P subunit [x Tritordeum sp.]
Score 1250
Evalue 0
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig35124 
TCAGGCTGACCTTTAGGCTCAAGTTATCAACAGTATCTATGGATATATAAGAGTTTTTTTTTTGAGAATAACTAGATTTTCTTTCCGTGTATGGCTAGGA
CATCAAAACAGATCTCCATTATTTGTCCTGTATTCAGAGAAGAGTGGAAATGCTAGCCAATATAGCTAATTTCACTTTCAAATGGGAATGGGGAGGCAGT
GGGGGGGTACAGAGGATACATGAGAAGGTGGCATTTGAGGAGAATATATACAGTACATGAGGGATTTAGAAGCAAGCATGCTTCCCTCCTACAGGAAGCA
TGATAACTTCTTGACACTGTTTCACACACCAGGATCGTCATCATCAGAAGATTACGCGGTGGCAGCTGCAGCTTCCTCTGCCACCTGGGACGCCTGCTGC
AGAGTGCAGATCAGGTTGCGATCCCCGTACACGTTGTCCACACGACATGTTGTTGGCCAGAACTTGGCACCCCGAAGCCACGCCGCGGGGAACGCAGCAT
ACTCCCTAGAGTATGGCTTAGTCCATGCATCGCCCATCAGGAGTTGGGGTGGGTGAGGAGCGCCCTTCAGGACATTGTTGTGCGCATCTGCTTTGCCATT
TTCTACCTCTGCAATTTCCTCTCTGATGGAGATAAGGGCATCACAGAACCTGTCTAGTTCAGCCTTGCTTTCACTTTCAGTGGGTTCAATCATAAGTGTG
CCTGGAACGGGCCATGACATGGTTGGTCCATGGAATCCGTAGTCCATCAAGCGCTTCGCCACATCCTCAGGCTCAATACCAGCAGTTGCCTTGAACCCTC
TTAAATCAATGATGAATTCATGGGCAACAGTTCCATTGACTCCACGGAAAAGAACTGGGTAGTGTTTCTCCAGACGCTTTGCCATGTAGTTCGCGTTCAG
GATAGCAATCTTTGAAGCTTCAGTCAGTCCCTGAGAGCCCATCATGGCTATGTAGGTGTACGAAATTGGAAGAATCAAAGCAGATCCCCATGGAGCAGCA
GAAATGGAACCAAGAGGGTTGGTTTTCTCAGGGAGAGGGAAGCCACCAGTGGGGATCACTGGATGAGATGGCAAAAATGGCGCCAAGTGCTTCTTAACAC
CAATAGGACCCATGCCAGGACCACCTCCACCATGTGGAATGCAAAATGTCTTGTGAAGGTTAAGATGGCAAACATCTGCTCCAATAAAACCAGGGCTTGT
CAACCCAACCTGAGCGTTCATGTTAGCTCCATCCATATAGACCTGACCGCCGTTCTCATGAATAATCCTGCATATCTCATCAATGCCTTCTTCGTAGACT
CCATGGGTTGAAGGATAGGTAACCATCAGAGCAGACAGGTTGTCCTTGTTTGCTTCAGCAGCTTTCCTCAACTCCTCAATGTTAATGTTACCTTTGGCAT
CAGTTCCGACGGCAACAATCTTCATTCCACACATAGCAGCACTTGCAGGGTTTGTACCGTGCGCAGAGACAGGAATGATGCAGACATTTCGGTGGTGGTC
TCCTCTTGCCTTGTGGTAGGCACGAATAACCATCAGTCCAGCATACTCTCCTGAAGCACCAGCATTCGGTTGCAAAGAGAACGAATCAAAACCAGTGATG
GTGTTCAACAGATCGCCCAGGTTGTCAAACATTTCATGATAGCCTGCAGCTTGATCAATAGGGGCAAATGGGTGCATGTTGGCGAACTTGGGATCGGTGA
CAGGCATCATCTCGACGGTAGCATTTAGTTTCATGGTGCAAGAACCAAGAGGGATCATACTGTGGCACAGTGAGAGATCCTTGGATTGCAACTTATGCAG
GTAACGGAGGAGCTCGTGCTCAGTGTGGTACATGCTAAAGATTGGGTGAGTCAAGTAGGGGCTGTCGCGCACAAGGCTAGGAGGAATTGAGCTTGAGACC
TCAGGCGCGATGGATTCAGCTGTTAAGTCCACTGGCTTGCCACCAGAGAAAACCTTGAACAGCTTGTCAACATCCTCCAAGGTGGTGGTCTCATCAAAGG
CAACAGTGATCGTGTTTGCGTCGACAACGCGAAGGTTCATCTCGTTTTTGCGGGCCTCCTCGGCAATCGCATTAGCATCGGCGCAAGTGATCTTGACCGT
GTCGAAGTAGGGCAGCTCCTGCACCGTCACTGTCCCGAGCTTCTTCAAACCATGGGCGAAAGTACCAGCCAGGCCATGGACACGGTCGGCGATCGC
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