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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig20428  (registered. 2012)
Contig Information
Length 1697 bp
Clones alternative view 127 Clones [Download: TSV  ,  FASTA ]
Wh_h Spike at heading date 1
Wh_oh Pistil at heading date 1
Wh_yd Spikelet at late flowering 1
Wh_SH - 7
Wh_KMP Shoot grown under continuous light 4
Wh_KMV Shoot grown with continuous light after cold treatment 2
Wh_MS Seed DPA5 of DT3DL CS wheat 1
Wh_SHDr Shoot grown with dessication 2
Wh_V4816 Shoot grown under cold condition for 16days 6
Wh_V483 Shoot grown under cold condition for 3days 3
Wh_VABA Shoot with ABA treatment 3
Wh_VHS Shoot with heat shock treatment 6
Wh_VWD Shoot grown with dessication 4
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 4
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 4
WH_XN Leaves, plant was grown at constant 23℃ 9
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23℃ ) 7
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23℃ ) 8
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27℃ ) 7
WH_XR Roots, 18 day old plants were grown hydroponically 1
WH_XE Seedling, infected with leaf rust 10
WH_XF Seedling, infected with leaf rust 10
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 11
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 6
WH_XV Leaves, plant was grown at constant 23℃ 4
WH_XX Leaves, seedling were infercted with blast strain Pr58 for 4 days (23℃ ) 5
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|129915|sp|P12782.1|PGKH_WHEAT|PGKH_WHEAT RecName: Full=Phosphoglycerate kinase, chloroplastic; Flags:"
Score 908
Evalue 0
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig20428 
TTTTTTTTTTACATCCTCAACCAACATCATTCCATCTTTGCCTTATAAATAAAACATTTGCTGGTGCTAATTATGTGAGCTAAGAAAGGGCAACTCAAGT
GAGCACAAATTGCTGGGGGTGTTATTCAAACAGTTCCCAGTATTTCTCTATAAAACATTGGTCTCTTACATTTCGAGTGGTCGAAGACGAGCAAAAGAGG
GAGGACAACATGGCAGGTTTGGAACGGTACATGAAAGGAATTAAGATGCAACAAATGAAGCTTAGCCTCATACGGTCACCGACCTCGTCATGACACCTTC
ATCAAGTGCAACGACTCCAGGAAGCTCCTTTCCTTCCAACAACTCCAAGCTGGCGCCACCACCAGTTGAGATGTGGCTCATAACATCAGCCACTCCCACC
TTCTCAACAGCCGCAACGGAGTCTCCGCCTCCAATGATAGTTGTCACACCCTTTTTGCTAAGCTCGGCCAACTTCTTTGCAATAGACTCAGTTCCTACTG
CAAACTTGTCAAATTCAAAGACACCCATTGGTCCGTTCCAAATGATTGTCTGTGTTGTGTCCAGGGCATCATTAAATGTTTTGACTGAATCTGGGCCAAT
GTCCAGCCCCATCCAACCATCAGGAATTGCAGATGCAGGGACGGTCTGACTGTTAGCATCAGGAGCAAACTTATCAGCAATGATAACGTCAGATGGCAAC
AGAAGGGAGACACCCTTTGCCTTTGCCTTTGCAAGGAGAGATGTTGCCAGCTCAAGTTTATCTTCCTCAACCAAGGAAGAACCAACTGAGAGTCCTTGTG
CCTTGTAAAATGTGAAGATCATACCACCACCCAAAAGAAGGATGTCACACTTCTCCAACAGGGATTCGATAACCCCAATCTTGGATGACACCTTTGAGCC
ACCCACAATGGCAGCAAATGGGCGCTTAGGGTTTGAAACAGCTCCATCCAGGTAGTCAAGTTCCTTCTGCAAAAGGAATCCAGCAACAGAAGGCTTCAAG
AACTTGGTAACTCCCTCAGTCGAGGCATGTGCTCTGTGGGCTGTTCCGAATGCATCGTTTACAAACAGATCTGCCAGTGACGCAAGCTTCTTTGCAAACT
CTGGGTCATTCTTCTCCTCTTCCTTGTAAAATCTTACGTTTTCCAGGAGCAAAACAGCACCATTTGCCAGGTCAGCCACCAATTTCTCAACTTCTGGGCC
GATAACATCTTCTGCTTTTTTCACCTCAATGCCAAGAAGCTCGGATAATCGGGGCACAAGGGGAGCCAAGCTAAACTTAGGAGTAACACCCTTAGGACGA
CCCAGGTGGCTGGTGAGGATGACCTTGGCGCCGTTGCTGAGGAGGTACTTGATGGTGGGGATGGCGGCGCGGATGCGGGTGTCGTCGGTGATGTTCTGGT
TGTCGTCGAGCGGCACGTTGAGGTCGGCCCGCACGAGCACGCGCTTGCCCTCGAGGTCGGCGGCGGTGAGGTCGCCCACGCTCTTCTTGGCCATGGTGGC
GACGGCGCGTGTCCCGCGCGCGGCGGACGCCGCCCGGCAGCGCGACGCGACGTGGACCGCGAGGCGCGGGTCGGCGCCGGCCGCGAACGCCAGCGAGCGC
GCCGGCTGGCACCCGGCCGCGAGCCCCGCGCCCCGGAGCGGCGCGGCGACGGACGCGGACGCGGCGCGGCGGGCGACGAGGGCGGCGGGCGGCGCGG
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