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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig5811  (registered. 2012)
Contig Information
Length 1618 bp
Clones alternative view 302 Clones [Download: TSV  ,  FASTA ]
Wh_e Seed DPA10 2
Wh_f Spike at flowering date 7
Wh_SH - 13
Wh_DPA20 Seed DPA20 2
Wh_KMP Shoot grown under continuous light 12
Wh_KMV Shoot grown with continuous light after cold treatment 14
Wh_OKCS Seed DPA5 2
Wh_SHDr Shoot grown with dessication 6
Wh_V4816 Shoot grown under cold condition for 16days 1
Wh_V483 Shoot grown under cold condition for 3days 10
Wh_VABA Shoot with ABA treatment 17
Wh_VHS Shoot with heat shock treatment 46
Wh_VWD Shoot grown with dessication 7
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 15
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 20
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 11
WH_XN Leaves, plant was grown at constant 23Ž 8
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 24
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 41
WH_SP 3
WH_XE Seedling, infected with leaf rust 5
WH_XF Seedling, infected with leaf rust 13
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 1
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 1
WH_XV Leaves, plant was grown at constant 23Ž 2
WH_XX Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 4
WH_XY Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 15
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|132087|sp|P00871.2|RBS1_WHEAT|RBS1_WHEAT RecName: Full=Ribulose bisphosphate carboxylase small chain PWS4.3,"
Score 353
Evalue 3.00E-95
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig5811 
TTTTTTTTTTGCAGTGCCAAATAAAGAAACTTTTCCATGAATTAATAACAGCAAGACAATGGTCCGCGTGTTGTATATAATAAATATTACACAGGTTTTG
CATATGTGTAGCCGGTGCATATAGACCTATGAGGAATTACGTATGCATGCTCAAGAACCTATGTTCGTACATACATACACAAATCATATAGAACAAAAGG
TATGCTCCGGTCCGAAAGCAGAGTCGTGCAGCAGAGTTGTGGACAAAAGTGAAGTTCACAAAAGACCTTCATACGAGATAGGCCATTGTTTCAACTCGTA
GTTTAGGCCTTGCCGGACTCCTCGCAACCCGGTGGCCTGAAGGCGATGAAGCTGACGCACTGCACCTGGCGCAGGTTGTCGAAGCCGATGACACGGACAT
AGGCGTCAGGGTACTCCTTCTTGACCTCCTCCACCTCGTTGAGCACCTGTGTGGCGTCGGTGCACCCAAACATGGGCAGCTTCCACATTGTCCAGTATCG
ACCGTCGTAGTACCCGGGGGAGCTGTTGTGCTCACGGAAGACGAAGCCAACCTTGCTGAACTCGAGGCAGGGCACCCACTTGGAGCGGATCAGGTAGTCG
ACCTGCTTCAGGAGGGCTTCCGTGGAGAGGGGTGGCAAGTAAGACAAGGTCTCGAACTTCTTGATGCCCTCAATTGGCCACACCTGCATGCACCTGATCC
TTCCGCCATTGCTGACGCTGCCGAGGCTGGCGCTGGAGCGGCGGCTGACGGGGAGACCGGCTGTGGACTTGAGCCCCTGGAAGGGTGCAACGGTGGTAGC
CGACGAAGCCATCACGGCGGGGGCCATGGTATTCTATTAACTGGAGGAGAGGAGGATGCCGCCACTCTGTACACCACCAACTAACACCACCCGTTGGGGG
CGTTACCTTCCAAAACTCCAGCATCCAATGGCGTTACGCCTCTCCGTCTCCTCGCCGCAGAGCACGGCCTCCTCGCCGGCCATCTCCTCATGCCGCCCCG
CCGCCTGCGGCCGCTTCCTGGCCTGCGTGGCCGCTTCTCAGAAGAGGAGCCTGATGGTGGTGTCCGGCTCTGACGGGAGGGGAGTGGCTCCGGTGAAGTC
GGGCGGCTTGGAGACGGCCACGACGGGAGCCGACGAGGTGGAAGCGCCCACAGCGGCGGTGGCGGTGACCGGGCAGGTCACGGAGGTCTGCAAGGACACC
TTCTGGCCAATTGTCAAGGCAGCAGGGGAGAAGCCCGTCGTCCTCGACATGTACACCCAATGGTGCGGCCCTTGCAAAGTTATGGCACCAAAATTCCAGG
AGATGTCTGAGAAGGACCACGACGTCGTATTCCTCAAGCTCGATTGCAATCAAGACAACAGGCCTCTTGCAAAGGAGCTTGGCATAAGGGTTGTACCAAC
ATTCAAGATTTTCAAGGATGGGAAGGTTGCAAAGGAGGTCACTGGTGCGAAGATTGATGAANNNNNNNGTGCGATTGAGGAAGTGAAGTCAAGCTGAGCA
ATTCCCTGGAAAGAAATGCACCAGTTAGCATGCTATCACTAGTGTACACTATGGGATGAAAACAGCCTTTGTGGAAGTGGATNNTCACCGTGGAGAAAAA
CAGTTATTATAGTTAAAA
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