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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Wh_VSCB_all.Contig249
Contig Information
Length 659 bp
Tissue Liquid cultured tissue
Clones 2 Clones [Download: CSV  ,  FASTA ]
whvs15b19    rwhvs15b19   
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os01g0962400 [Oryza sativa (japonica cultivar-group)] >gi|20140685|sp|Q94DM8|UFM1_ORYSJ RecName: Full=Probable ubiquitin-fold modifier 1; Flags: Precursor >gi|15289926|dbj|BAB63621.1| putative Ubiquitin-fold modifier 1 [Oryza sativa Japonica Group] >gi|113535009|dbj|BAF07392.1| Os01g0962400 [Oryza sativa (japonica cultivar-group)] >gi|125529215|gb|EAY77329.1| hypothetical protein OsI_05311 [Oryza sativa Indica Group] >gi|215765210|dbj|BAG86907.1| unnamed protein product [Oryza sativa Japonica Group]
Score 415
Evalue 5.04954e-39
Total Hit Count 75
Registered year 2003
Contig Sequence     [ Download ]
>Wh_VSCB_all.Contig249 
GAGAGAGAGAGAGAGATCGCATCGGCCGAACCAAAATTCTATCACGCGACCCCGGCAAGGCGAACCACCAGGCGGCGGCGGCGTATCGGCAACCCACGGC
ACACCCATGGCGGCGGCGGAGGGCGGCGGCGGCGGAGGCGGGGGGAAGGTGTCGTTCAAGGTGATCCTCACCTCCGACCCCAAGCTCCCCTTCAAAGTGT
TCAGCGTGCCGGAGGCGGCGCCCTTCACCGCGGTGCTCAAGTTCGCCGCAGAGGAGTTCAAGGTCCCGCCCCAGACCAGCGCCATCATCACCAACGATGG
AGTAGGCATCAACCCACAGCAAAGTGCAGGCAACGTGTTCTTGAAGCATGGCTCGGAGCTGCGCCTCATTCCCCGCGACAGAGTTGGAGCGACGGTGCCG
TCTTTCTAGTCGTCATTGTTAGAGTCAACAATGAATGAAGGAACCTATATAACAGGAATAAAGGCATGTCGATGCTCGGTTGTATAATGGATGTAACTTT
GTTGAGAGTAATTTACCATCAACAGCCAGCCAGCCCTATGATTGACAGGATGAATATAGCTTGCCAGACAGTGCCATGTGTTGCTGTCTTTGTTTGCAGC
CCCTGATTTCCTGGTAATGCTCTTAAAAATCAGGGAGCGTCTGCTTCGAGAGAGGAAAA
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