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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig4637  (registered. 2012)
Contig Information
Length 942 bp
Clones alternative view 52 Clones [Download: TSV  ,  FASTA ]
Wh_h Spike at heading date 1
Wh_r Root 5
Wh_EMI Dormant seed with water absorption after breaking 2
Wh_SHC Shoot grown with cold treatment 1
Wh_SHDr Shoot grown with dessication 2
Wh_VHS Shoot with heat shock treatment 3
Wh_VWD Shoot grown with dessication 1
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 2
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 3
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 2
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 4
WH_XR Roots, 18 day old plants were grown hydroponically 7
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 4
WH_XT Roots, 18 day old plants were grown hydroponically 7
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 5
WH_SP 2
WH_XD Root, treated at 50 microM Al for 6h 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|115334277|dbj|BAF33069.1|| aquaporin [Hordeum vulgare]
Score 569
Evalue 1.00E-160
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig4637 
TTCGGCACGAGGGAGAGCTAAGCGCATTCGCATCTTGAGCACAGACACCCACCCTAGCTTGTCGATCAGTCGAGGCAGCGACGATGGCCAAGGACATCGA
GGCGGCGCCCCCCGGAGGGGAGTACGGAGCCAAGGACTACTCTGACCCGCCGCCGGCGCCGCTCTTCGACGCCGAGGAGCTGACTAAATGGTCCCTGTAC
CGCGCGGTCATCGCCGAGTTCGTGGCCACGCTGCTCTTCCTCTACATCACCGTGGCCACTGTCATCGGGTACAAGCACCAGGCGGACCCCGCCGGCCCCA
ATGCTGCCGACGCGGCCTGCAGCGGCGTCGGCATCCTCGGCATCGCCTGGGCGTTCGGCGGCATGATCTTCGTGCTCGTCTACTGCACTGCCGGGGTTTC
CGGTGGCCACATCAACCCGGCGGTGACGTTCGGGCTGTTCCTGGCGCGGAAGGTGTCGCTGGTGCGCGCGCTGCTCTACATCATCGCGCAGTGCCTGGGC
GCCATCTGCGGCGTCGGGCTCGTCAAGGGGTTCCAGAGCGCCTTCTACGTGCGCTACGGCGGCGGCGCCAACGAGCTCAGCTCCGGCTTCTCCAAGGGCA
CCGGCCTCGCCGCCGAGATCATCGGCACCTTCGTGCTCGTCTACACCGTCTTCTCCGCCACCGACCCCAAGCGCAGCGCCCGTGACTCCCACGTCCCGGT
GCTGGCTCCTCTGCCAATCGGCTTCGCGGTGTTCATGGTGCACCTGGCCACTATCCCGATCACCGGCACCGGCATCAACCCGGCAAGGAGCTTTGGAGCT
GCCGTGATCTACAACAACGAGAANNNCTGGGATGACCACTGGATCTTCTGGGTGGGGCCATTCATCGGGGCCGCCATCGCCGCCGCCTACCACCAGTACG
TCCTGAGGGCCAGCGCCACCAAGCTCGGCTCGTCTGCCTCCT
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