Home About update informationSite map Contact Us
Japanese | English  
Genome / Development
cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig23912  (registered. 2012)
Contig Information
Length 1387 bp
Clones alternative view 152 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 2
Wh_e Seed DPA10 2
Wh_f Spike at flowering date 1
Wh_h Spike at heading date 1
Wh_oh Pistil at heading date 1
Wh_r Root 1
Wh_yd Spikelet at late flowering 1
Wh_CSEC Callus 3
Wh_DPA20 Seed DPA20 1
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 1
Wh_KMP Shoot grown under continuous light 3
Wh_KMV Shoot grown with continuous light after cold treatment 4
Wh_MS Seed DPA5 of DT3DL CS wheat 2
Wh_OKCS Seed DPA5 6
Wh_PCDAM Anther at meiosis 4
Wh_RDr Root of dessiccated seed 1
Wh_V4816 Shoot grown under cold condition for 16days 2
Wh_V483 Shoot grown under cold condition for 3days 4
Wh_VABA Shoot with ABA treatment 2
Wh_VSCB Liquid cultured tissue 2
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 1
WH_XJ Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 1
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 4
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 3
WH_XN Leaves, plant was grown at constant 23Ž 5
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 3
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 5
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 2
WH_XR Roots, 18 day old plants were grown hydroponically 5
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 5
WH_XT Roots, 18 day old plants were grown hydroponically 14
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 3
WH_SP 5
WH_XB Root 5
WH_XC Root, treated at 50 microM Al for 6h 8
WH_XD Root, treated at 50 microM Al for 6h 8
WH_XE Seedling, infected with leaf rust 12
WH_XF Seedling, infected with leaf rust 3
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 3
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 9
WH_XV Leaves, plant was grown at constant 23Ž 2
WH_XX Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|226499354|ref|NP_001147027.1|| polyubiquitin containing 7 ubiquitin monomers [Zea mays]
Score 448
Evalue 8.00E-124
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig23912 
ATCTCTCTCGTTTTCTGTAAATATGTCCAGAGCTGGTAGCGGCTTAAAGAACAACAGCAGATCCACAAGCACTTGACAACTGTTCCAGTCACGCAAATCA
TAGCCAAATGACAGTGATAAAGTTCAGAGTAGCACATAGGAATTGACATGAATGGTGCACACTAACAAGTGATCAAAGATCATGTGCTTATTTAGAATAG
AGATTGCAAATCTGCATTCTGAAAAGGTTCCCAGATCTGTACGTCGTTGGTCGGCGAAGATGACATCTAGCCCTGGAGCCCGATGATTCCGCAAGCAACA
CGGGCACCAGCGTTTCCAGTGCTCTTGCTCAGCTCATGTCCACCCTTGCCAAGATCATCAGCGTCACCATGGACGACAACAGCACGGCCAACAATTGAAT
TTGGTCCAGTAAGGGGGATATGGCAGTCAGTAACATTGATGTTAGCAACACCATCATCCAGCCCCCTCCGATCGAAGCGAAGTCAAGGCTCTTTCGTCCT
CCTCCTCAAGATGCAGATCTTTGTGAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTTGAGTCCTCGGACACCATCGACAACGTCAAGGCTAAGATC
CAGGACAAGGAGGGCATCCCTCCGGATCAGCAGCGTCTCATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTGGCTGACTACAACATCCAGAAGG
AATCCACACTCCACCTGGTGCTCAGACTCCGTGGTGGCATGCAGATCTTCGTCAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTTGAGTCCTCTGA
CACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGTCTCATTTTTGCTGGCAAGCAGCTCGAGGATGGCCGC
ACGCTCGCTGACTACAACATCCAGAAGGAATCCACACTCCACCTGGTGCTCAGGCTCCGTGGTGGCATGCAGATCTTCGTCAAGACCCTGACCGGCAAGA
CCATCACCCTGGAGGTCGAGTCCTCTGACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCACCGGACCAGCAGCGTCTCATCTT
TGCTGGCAAGCAGCTTGAGGATGGCCGCACTTTGGCGGACTACAACATCCAGAAGGAGTCCACACTTCACTTGGTGCTCCGTCTGCGCGGTGGCCAGTAA
GCTCCTGGCCATGGATCTGCTTCTGTCTCTGGGTTCACAAGTCTCGTTGTCCTCGGTGTCCTCCAATGGAGTCTGGTCTGTGTCCGTTGATGCCTGAACT
GTCTTTGTTTGTATACCATATACTGTGATGCAGTGTTATCGTTTGTATCTGCAAACTTCTGCTGGTGTGCGGAAGCTTTGATGAACT
page-top