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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Wh_OKCS_all.Contig2388
Contig Information
Length 1185 bp
Tissue Seed DPA5
Clones 8 Clones [Download: CSV  ,  FASTA ]
whok20c15    whok5f02    rwhok4p22    rwhok5f02    rwhok13b03    rwhok20c15    rwhok20c16    rwhok20f24   
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os02g0519900 [Oryza sativa (japonica cultivar-group)] >gi|49387779|dbj|BAD26337.1| putative elongation factor 2 [Oryza sativa Japonica Group] >gi|113536503|dbj|BAF08886.1| Os02g0519900 [Oryza sativa (japonica cultivar-group)] >gi|119395216|gb|ABL74569.1| elongation factor 2 [Oryza sativa (japonica cultivar-group)] >gi|125539668|gb|EAY86063.1| hypothetical protein OsI_07431 [Oryza sativa Indica Group] >gi|125582310|gb|EAZ23241.1| hypothetical protein OsJ_006724 [Oryza sativa (japonica cultivar-group)]
Score 1182
Evalue 3.78716e-179
Total Hit Count 500
Registered year 2003
Contig Sequence     [ Download ]
>Wh_OKCS_all.Contig2388 
TTTTTTTTTTGACATCAAAACAAAGTGCCAGTATCACGACAGATAGGAGTACATTCCAATAGCAATACAGCCACGACTCAGTAGACACAAAATAATAGTG
CAGCTCTCTTAGCAGCAAAACCAACTACACTATATAGGAGATAACAGAACCAAAAGTTTAGAGCTTGTCCTCGAAATCAGACAGAGGGGTCATCTGTTCC
TTCAGACCCTTGCGCTTGCGGATCTCCGTGACAAGGGTGGCAGACTGGGAGCCGGCCTCCAAAGGATCCGAAGACATGATGTCCCAGTGATCGAACACAC
ACTGGGGGAAAGCCTGGCCAGATGTCGCAGCCCTGAGGGTACTTGAGAACCCGAACGACTCGATGACCGGGAGGTAAGCCTTGATGTTGTACAGCGGGGT
ACCAGGCCTCTGCATCTCCTCAAACACGTGCCCTCTCTTCTGATTCAGAACACCATAGATACCGCCGAGTGCATTCTCCGGGGCCTGGATCTCAACCAGG
TACACAGGCTCCAGCAGCCTTGGCTTAGCAGTGAGCTGAGAAGCATAAATGACCCTCCTGGCTGTTGGGATGACCTGGCCACCACCCCTGTGAATAGCAT
CAGTGTGCAGAACAACATCACAGACCTCAAAGCAGATGCCACGCATGTTCTCCTCAGCCAAAGCACCTTCTTTCGATGCCCACTGGAACCCAGCCACAAC
AGAGTCCTTGATTTCATTCAGATACTGCACTCCCTTACACATGTCGACAACCATGTTGGGGCCAGTCGTCTCAGGTCCAAAGCACCAAATCTTCTTGGCA
AGATCCTTGTCCCAGCCAAACTCCTCAGATAGGATCTTAGAGCGCACCTTAGGGATCATCACGTGGGCCAATGCGGCCATCATCAATGGCCTCAGCCAGT
CCCTCCTCCAATGGGCGAGCCTCCATGTAAAGACGGTTGTGCTTGTTCGGGGACTTGCTCATAACTGTGCGGCAGGACTTCTCCAGAACAGTCTCACGGA
AGGAGACAACAGGAGGTGAGACAATAATTTCAGCACCACCCATGAAGTCCTCCTGCAGATCCTTCAAACAGATTTCAAGGTGAAGCTCACCAGCTCCAGC
AATGATATGCTCACCAGACTCTTCAATGCTACAGAGAACCATAGGGTCAGACTTCGCCAGCCGCTTCAAACCCTCAACAAGCCCT
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