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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig17539  (registered. 2012)
Contig Information
Length 2317 bp
Clones alternative view 4647 Clones [Download: TSV  ,  FASTA ]
Wh_e Seed DPA10 50
Wh_f Spike at flowering date 42
Wh_h Spike at heading date 49
Wh_yd Spikelet at late flowering 6
Wh_SH - 140
Wh_DPA20 Seed DPA20 20
Wh_EM Dormant seed with water absorption 2
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 2
Wh_KMP Shoot grown under continuous light 221
Wh_KMV Shoot grown with continuous light after cold treatment 160
Wh_MS Seed DPA5 of DT3DL CS wheat 6
Wh_OKCS Seed DPA5 15
Wh_PCDAM Anther at meiosis 5
Wh_SHC Shoot grown with cold treatment 9
Wh_SHDr Shoot grown with dessication 46
Wh_V4816 Shoot grown under cold condition for 16days 139
Wh_V483 Shoot grown under cold condition for 3days 55
Wh_VABA Shoot with ABA treatment 102
Wh_VHS Shoot with heat shock treatment 28
Wh_VWD Shoot grown with dessication 79
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 6
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 259
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 9
WH_XN Leaves, plant was grown at constant 23Ž 468
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 153
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 344
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 273
WH_XR Roots, 18 day old plants were grown hydroponically 4
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 2
WH_XT Roots, 18 day old plants were grown hydroponically 3
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 4
WH_XE Seedling, infected with leaf rust 554
WH_XF Seedling, infected with leaf rust 351
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 377
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 295
WH_XV Leaves, plant was grown at constant 23Ž 171
WH_XW Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 57
WH_XX Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 70
WH_XY Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 71
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|14017580|ref|NP_114267.1|| ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit"
Score 991
Evalue 0
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig17539 
TTTTTTTTTTATTGTTGAATAATGCCAAATCAAATCAAAAAAAATCCAAAAGTAAAAAGGAAATGAATTAGTTAATTCAATAAGAGAGAAAAGGGGACCA
GGACTTGATTTCGTTGCCCAAGCGAATCCCATTCAATCGTTTACTCATGGAATGAGTCCGTTGGAAAGTTCAATCAATCTTTTTTTCATATACATTTTGC
CTTTTGTGGAGGATCTGTGCCTACTCTACTTTCCTATCTAGGACTTCGATATACAAAATATATACTACTGTGAAGCATAGATTGCTGTCAACAAAGAATT
TTATTAGTATTTAGTTAGGTATTTGCATTCAAAATAAGAAAAGAGAACTATTAAGAACTTTTAAAATAAGGATTAGGAATTAATTTGGGTTGCGCTATAT
CTATCAAAGAGTATACAATAATTATGGATTTGGTAAATCAAATCCATGGTTTAATAACGAACCGTGTTAACTTACCATAACAACAACTCAATTCCTATCG
AATTCCTATAGTGGAATTCCTATAGGATAGAACATACACAGGGTGTACGCATTATATATGAATGAAACATATTCATTAACCTAAGCATGCCCTCAATTTT
CTTTAATGAGTTGATATTATATTAATTGAATATCCTTTTTGTTTTACGAGATTTTTGCTAAAGTTTCATTTACGCCTAATTAACATCGAGTAGACCCTGT
TATTGTGAGAATTCTTAATTCAAGAGTTATAGGGAGGGACTTATGTCACCACAAACAGAAACTAAAGCAGGTGTTGGATTTAAAGCTGGTGTTAAAGATT
ATAAATTGACTTACTACACCCCAGAGTATGAAACTAAGGATACTGATATCTTGGCAGCATTCCGAGTAAGTCCTCAGCCTGGGGTTCCGCCCGAAGAAGC
AGGGGCTGCAGTAGCTGCCGAATCTTCTACTGGTACATGGACAACTGTTTGGACTGATGGACTTACCAGTCTTGATCGTTACAAAGGACGATGCTATCAC
ATCGAGCCTGTTGCTGGGGAAGACAGCCAATGGATCTGTTATGTAGCTTATCCATTAGACCTATTTGAAGAGGGTTCCGTTACTAACATGTTTACTTCCA
TTGTAGGTAACGTATTTGGTTTCAAAGCCCTACGTGCTCTACGTTTGGAGGATCTACGAATTCCCCCTACTTATTCAAAAACTTTCCAAGGCCCGCCTCA
TGGTATCCAAGTTGAAAGAGATAAGTTGAACAAGTATGGTCGTCCTTTATTGGGATGTACTATTAAACCAAAATTGGGATTATCCGCAAAAAATTATGGT
AGAGCGTGTTATGAGTGTCTACGTGGTGGACTTGATTTTACCAAAGATGATGAAAACGTAAACTCACAACCATTTATGCGCTGGAGAGACCGTTTTGTCT
TTTGTGCCGAAGCTATTTATAAATCACAGGCCGAAACCGGTGAAATCAAGGGGCATTACTTGAATGCGACTGCGGGTACATGTGAAGAAATGATTAAGAG
AGCTGTATTTGCAAGAGAATTAGGGGTTCCTATTGTAATGCATGACTACTTAACTGGGGGATTCACCGCAAATACTACTTTGGCTCATTATTGCCGCGAC
AATGGCCTACTTCTTCACATTCACCGTGCAATGCATGCAGTTATTGATAGACAGAAAAATCATGGTATGCATTTCCGTGTATTAGCTAAAGCATTGCGTA
TGTCTGGGGGAGATCATATCCACTCCGGTACAGTAGTAGGTAAGTTAGAAGGGGAACGCGAAATGACTTTAGGTTTTGTTGATTTATTGCGCGATGATTT
TATTGAAAAAGATCGTGCTCGCGGTATCTTTTTCACTCAGGACTGGGTATCCATGCCAGGTGTTATACCGGTAGCTTCAGGTGGTATTCATGTTTGGCAT
ATGCCAGCTCTGACCGAAATCTTTGGGGACGATTCTGTATTACAATTTGGTGGAGGAACTTTAGGACATCCTTGGGGAAATGCACCTGGTGCAGCAGCTA
ATCGAGTGGCTTTAGAAGCCTGTGTACAAGCTCGTAACGAAGGGCGCGATCTTGCTCGCGAAGGTAATGAAATTATCCGAGCAGCTTGCAAATGGAGTCC
TGAACTAGCCGCAGCTTGTGAAGTATGGAAGGCGATCAAATTCGAGTTCGAGCCGGTAGATACTATTGATAAGTAGATAAAACTAAAGATAAAGAAGAGA
AGGTATAAATAAAAAAGAAACGAAATAAAAAAAAAAAAAAAAAAGTTATGAAATGCAGTCATCAATTCGTTCGTCTTCTAATTGATTGCAATTAAACTCG
GCTCAATCTTTTTTTTC
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