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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Wh_V4816_all.Contig1441
Contig Information
Length 603 bp
Tissue Shoot grown under cold condition for 16days
Clones 5 Clones [Download: CSV  ,  FASTA ]
whv16n1e02    whv16n2e02    whv16n11l01    rwhv16n1e02    rwhv16n11l01   
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os03g0240700 [Oryza sativa (japonica cultivar-group)] >gi|108707094|gb|ABF94889.1| expressed protein [Oryza sativa (japonica cultivar-group)] >gi|113547981|dbj|BAF11424.1| Os03g0240700 [Oryza sativa (japonica cultivar-group)] >gi|215701278|dbj|BAG92702.1| unnamed protein product [Oryza sativa Japonica Group] >gi|218192415|gb|EEC74842.1| hypothetical protein OsI_10697 [Oryza sativa Indica Group]
Score 421
Evalue 8.30788e-40
Total Hit Count 40
Registered year 2003
Contig Sequence     [ Download ]
>Wh_V4816_all.Contig1441 
CCTCGTGCCGCTCACCTCGATGCTTCTGCAGCCCATGGCCGCCGTGCTCCCCTTCGCCGCCTTCCAGCTACTCGATATCTACTGGAAGAACGAGCACAGG
CTGATTTGCACGGGGGAGATGTGCACCTCCGAGGAGCGTGTCCGCTTCGAGAAATCCATTTTCAAGTCCCAGAGGAATGTCATCCTTTGTGTTTCAGTAT
TTATCCTTTATTGGTCCATCTATCGCATTTGCAAGTTCAACAAGGACATCAAGGCACTGGAGGAGGTTGAGAAGCGCATCAAGGAAGAGTAGAATCATCC
TAGTTTGTGATGGATTTTGTGGTATTCCCGACCTTCAGCAGATGTATCCAGACTTTAGGATATCCATTGTATATTTGGTTCTCCTATGAGCAAGTAGAAT
GTAACCTGTTTCGACGCTTCACATTCCTCCTTTCTTGGACCGGCTGTTCTATATGTAACTTGTGGCGGTGGCTACTACAAAGACATCTAAATGTTTCCAT
ATTAGTCATCCTTGAAGTTTGAACATCTGCTAGTATGTTGACTGGACCGACCTTTCGGTGGTCTTCCGTGTTGAAATAGTCTGGTGTTTCTGTAAAAAAA
AAA
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