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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig15292  (registered. 2002)
Contig Information
Length 865 bp
Clones 19 Clones [Download: TSV  ,  FASTA ]
Wh Spike at meiosis 3
Wh_SL Seed DPA30 7
Wh_e Seed DPA10 2
Wh_f Spike at flowering date 7
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os03g0835900 [Oryza sativa (japonica cultivar-group)] >gi|40714664|gb|AAR88570.1| putative ferredoxin [Oryza sativa (japonica cultivar-group)] >gi|108711958|gb|ABF99753.1| Ferredoxin-3, chloroplast precursor, putative, expressed [Oryza sativa (japonica cultivar-group)] >gi|113550292|dbj|BAF13735.1| Os03g0835900 [Oryza sativa (japonica cultivar-group)] >gi|125546341|gb|EAY92480.1| hypothetical protein OsI_14217 [Oryza sativa Indica Group] >gi|125588544|gb|EAZ29208.1| hypothetical protein OsJ_012691 [Oryza sativa (japonica cultivar-group)] >gi|215768071|dbj|BAH00300.1| unnamed protein product [Oryza sativa Japonica Group]
Score 617
Evalue 3.22991e-62
Total Hit Count 500
Registered year 2002
Contig Sequence     [ Download ]
>Contig15292 
gttggaattggtttaaaagataggaagaaacccgacgaaccagcaaaaacggcacaaagacacacgcaaaaaaccatgaaaccgCTTTATAATGCCGTCA
CAgtcacaGCGAGCTGTTCCCTCATTTTATTCGCCTTCTCCATCCGTGGGTGTAGTGGCTTCACCCAACAATCTTAACCACCTCCGACCAACGACCAAAG
CACGCACGCACACAGGCAGCAGCCAGGCAGGGGATAAACAACCATCAAGGTTTTACAG*ACAGACACACCTT*CTTCTTCTACCCAACACACAACCAACT
GGCACCAG*AGATGTGGGCGGAGCACGGCACGCCCCC*TAATACAGGTCCCCCTCCTTGTGGGTGTGGATGACGCAGTCCGACTTGGGGTAGGCGACGCA
CGTCA*GCACGTAGCCCTCCTGCTGCGCGTCGTCCAGGAACGACCCGTCCGACTGGTCCACCGCGCCCGCCTCAATCTTGCCCGCGCAGGTCGAGCATGC
CCCCGCCCGGCACGAGTAGGGCAGCTCCACCCCCGCCGTCTCCGCCGAGTCCAGGATGTAGGTGTCGTCCGGCGCCTCAAACTCGTGCTCGTCCCCCTCC
GGGGTCACCAGCTTCACCTTGTACGTGGCCGCCGCGGAGACGTCCAGCTTCTTGAAAGAGGAGGACCTCAGGCTCGGCACCTGCACGGCGCCTCGGCCAA
GGAAGCTCAGGCGGCTCTTGACCGCTTTCTGGGGGGCATCGGTTGTTCGAGCATTGCCCAAGAGCACGCAGGAGGTCGCAAACGTGCAGGTTGACATC*T
TGAAACCTGTCGCGGCGGGCCGGCGAGGAGGGACGGGGCGGCGGCGGCGGCTTCCcttcctcctc
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