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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig9629  (registered. 2012)
Contig Information
Length 822 bp
Clones alternative view 55 Clones [Download: TSV  ,  FASTA ]
Wh_dL Crown of seedling 2
Wh_f Spike at flowering date 4
Wh_h Spike at heading date 1
Wh_r Root 1
Wh_yd Spikelet at late flowering 7
Wh_EM Dormant seed with water absorption 1
Wh_KMV Shoot grown with continuous light after cold treatment 3
Wh_RDr Root of dessiccated seed 1
Wh_SHC Shoot grown with cold treatment 2
Wh_VABA Shoot with ABA treatment 1
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 2
WH_XJ Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 2
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 1
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 3
WH_XR Roots, 18 day old plants were grown hydroponically 5
WH_XT Roots, 18 day old plants were grown hydroponically 2
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 5
WH_SP 1
WH_XA Root 1
WH_XB Root 3
WH_XC Root, treated at 50 microM Al for 6h 3
WH_XD Root, treated at 50 microM Al for 6h 1
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 2
WH_XY Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|15808779|gb|AAL08496.1|| ascorbate peroxidase [Hordeum vulgare subsp. vulgare]
Score 363
Evalue 9.00E-99
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig9629 
TTTTTTTTTTGTGGGCAACCAAATTTTCATTTCGTCCTCGACAGGGAATAACAATTCAACCGGAAAGGAACTACATAACACTTAGCAGTTCAGACTACAA
GAACGCCCATCACAAGATGACACGAGGCGTCGAAAGCAAAACAATGCAACACCCCATCGACCAACCCATCTAATCCAAGTCCAGACAAACACATGACATG
GCCGCAGGCCAACACATCCTTATTGCTCTTCTTCTTCATGATCTTCTTCTTCTTCATTAACCTTCAGGCGCCGAGCTTGAATCAGCAGCAGCCCTCAACA
GCCTCGCCAAATCCCAATTCGGAGAGCTTGAGGTGTGCCTCAGCGTAGTCAGCAAAGAAAGCATCCTCATCCGCAGCATATTTGTCCACAAGTGGGCGGA
AGGCCGGGTCAGTCAGGAGGGTCTTGTCGGTCGGCAACTGAAGAAGGCCTTCCTTCTCCCCACTAAGGAGCTCAGTGAAGTAAGAGTTGTCGAAGATCAA
AGGGTTGGCGGTCCAGGCTCCCTCAAAGCCGGATCTCTCCTTGTGGCATCTTCCCAGGGTGTGACCACCAGAAAGAGCAACAATGTCCTGGTCACTCAAA
CCCATCTGAGTGGAAAACACCTGCCTGAGGTGGTCAGAGCCTTGGGTAGCATCAGGAAGACGGCCTTCTGGAGGAGGCTCGGGCTTGTCCTGTCTCCCCG
GGTGGAAGGGAACCTCGGGCCCGCCGGTGACCTCGACGGCGACGACTCCAGCGAGCTGGTAGAAGTCGGCGTANNNNAGGATGGGGAACTGCTCCTTGAT
GGGCTCGAGCAGCCTGACGGCG
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