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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig14051  (registered. 2002)
Contig Information
Length 1147 bp
Clones 10 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 2
Wh_h Spike at heading date 2
Wh_oh Pistil at heading date 2
Wh_yd Spikelet at late flowering 2
Wh_yf Spikelet at early flowering 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os06g0114700 [Oryza sativa (japonica cultivar-group)] >gi|7248408|dbj|BAA92731.1| unknown protein [Oryza sativa Japonica Group] >gi|55296186|dbj|BAD67904.1| unknown protein [Oryza sativa Japonica Group] >gi|113594646|dbj|BAF18520.1| Os06g0114700 [Oryza sativa (japonica cultivar-group)] >gi|215692581|dbj|BAG88001.1| unnamed protein product [Oryza sativa Japonica Group] >gi|218197447|gb|EEC79874.1| hypothetical protein OsI_21376 [Oryza sativa Indica Group]
Score 887
Evalue 2.48483e-93
Total Hit Count 150
Registered year 2002
Contig Sequence     [ Download ]
>Contig14051 
ttttttttttcaacctcaacattacccagttcATTTAAAATTCAAATATCCATACCGACGAAACAGGCATGCCGCCGCCTTTCTCAAGTCTCAAACAAAG
AAAAAGAGAAGACTGATGAACCTAGCTAATAATAACGGTAACCAAGCTGCTGCTATTGTTCTAACCTGCAGGGCTATACAAACCAAACTCGCCAACATAG
CGTTCATGTGGGCCGTCGAAACGGCTTAGGTACTACGACTGCGATCACGGGAACTGCTGCCGGTTGCAAGTGTCCTCATGGGCGACCCTCGAAATGGCTG
GCTTGAATATGGCTGTGATCACTCATGGGAACTGTTGCCGGTTGTAGGTGTCCTCATGGACGAACACCGGCTCGCTGCTCTGCTGCGGGATCACGGGCTG
GCCCATGGAGATGCCCTGGTTCTGCTGCGGGCCCCAGCTCGGCGGGCCTTTCGACGACGTCAGGGCCACGTAGTAGACTATGGCCAGGGCCACGCTCGCG
AGGGAGAGCACCGCCCCTCCGGAGAAGACCCCCGGCTTGACGACGTAGCAGAAGCTGCCGAAGTACATGTTCTCCTGGCCCCTTTGGTCGTTCAGCGCGG
CTCCGGTCAGCAGGAGAAGGAACGCGATTATGAAAGTGACCCAAGATACGATGAATGAGATCAGAGCCACACT*CCAGTTAGTGTCTGAAGGAACCGGAT
GCCTCTTACAACAGATGCAACCAGCAACTGTATTGATAATAGCCTGTGCGACCATAAGGGCGACGGCAGACATCAACCCAAGGCCTAAcgctgGGCTTCT
TGGGTATATGCATTCCCCTGGAGAAGAATCAGTTTGCACATCCGAAACCTTGACGCGGGTGCCCTCGGCGGCGAAGCCTAGCGCGGCGGAGAGGACGCCG
AGGAAGGCGACGAGCGCGCACACCACCACCGCCTTCCGCTCCAtccccttccttcctcctccaccaacctcccaccaaccttgttgcgagccacgcccgc
cggatctaccaccccctgcctccctcctcctccccgatccgcctcggcccggctcccgtctccaccagcacagcacagcactcacctgcagcagcaagca
agcaagcgaggcaacggcggaggaggacaaaagagggccgggcacgc
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