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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig14936  (registered. 2012)
Contig Information
Length 1597 bp
Clones alternative view 48 Clones [Download: TSV  ,  FASTA ]
Wh_V483 Shoot grown under cold condition for 3days 4
Wh_VABA Shoot with ABA treatment 5
Wh_VHS Shoot with heat shock treatment 11
Wh_VWD Shoot grown with dessication 3
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 1
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 2
WH_XN Leaves, plant was grown at constant 23℃ 3
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27℃ ) 4
WH_XE Seedling, infected with leaf rust 9
WH_XF Seedling, infected with leaf rust 1
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 5
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|115462609|ref|NP_001054904.1|| Os05g0208000 [Oryza sativa (japonica cultivar-group)]
Score 562
Evalue 4.00E-158
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig14936 
GGCACACAACAGAACCAACAAAAATGTTTGTGCGTGATATACCAAGAAAAATACAACAACAACGAGAATTAACTACACATATTACCCTGCCAAAAAAAGA
TACATGTTGACACTTGTCAAACATAAGGCCTAAACAAATATATAGTCCCTCCGTCCGAAAAAACTTGTCCTTCAAATGGATGTATCTAGCACCAAGTTAG
TGTTAGATACATCTATTTGAGGAACAAGCTTGGGGCAAGTTTCTTCGGACGGAGGGAGTACTGAAAAAGTTTGTTTGATGTCTGGCTCCACTGATGAGAT
GGGTTCAACCCGGTGGTGGCATATCTGCTCCTAACTCTACTTTCAGCCAAAAGTTACCCAGAAATGATATGATTATTTCTTCTGAAAGACACAGAGAACA
ATGGTAGCATATAGGCCAAGGAGATAAGTACAGATTTTGTCTATCAGAACCAACTGCTGATTTATACTGTAGGTACAAAGCAGCTACACTATTATAATTT
GTCGGCAAGGATAGCATAGCACGGCACTTTAAAGGCCGACACGCTTCTCGACCTTCTGGATCTGATTCAAGAATATCCAAGTCATCATGACATGTGGAGC
AATCCTGACACAGTAGACCGGAAAGCCAGTGTAGAACTTAAATGGACCACCACTCTTCAAGGTCTTCATTGCACAGTCAAGAGACCCAGTGTATGGATAC
TTTCCAGTAGCATCAGGTTGCATCTTCTGAACCTGTGTCTTAACATAGTCGAAGGGCAAACTGCAAGCAGACGCGAAGAATCCTGAAACAGCACTGGCCC
CAAGCATTGTAGAAAGTTCACCAGCACCAAGTTTGTCTCTAAGTACCTCAACACTCTGATCATAGGAGGCAAGCATGCCCATGTTTAGTGACATCGCTCT
AGCTACAGTTGGACCTGCGCCCTTCCAAAGTGCCAGAACACCTTCATCAGCAATAATACGATAAAGTGCATGAAAAGCATTCTTATAGTGGCGGCGCTGG
GCTGCTGGCAAGGTTGAATCAGCCTGCATCCTAATGAGTGCCAAATCCGCAGGACTACCAAAACACGCTCCAATCGCTCCAGCAGTGAGACCAATAGCAG
CCTTCTGGACTAAGGGCAGTGGTTTTCCTTCGTTTGCTTCAACTGCTTTATTTGTGAGAACCCTGAAGGATCCAAGTCGAGCGGTTGTGTATGTCGCTTG
CCTTAGCAAGCCAGCAGATAATCCCTTGTAAAAGGAACCAACTCCCTCATTAGCAAGCATCTTCTTGGTGACAGAAGTTGCAGAGCCCTCGCCCAACTGG
ATCTTCACCTTGACCATGTCGATGGGCTGGATGACGCAGGTGGCGAGCATGCCGGAGGCGCCGCCGTTCACGAAGGGCTTCACCGTCTTCCAGACGCCGC
TGGCCGCCAACGCCGTCTGCGGCGGCTGCTGCTGCTTCGCATCCGCCATCTCCTCCGCCTCGTATCAACTCCCACCGATCCTGAGCTAGGAGGAGCTCCC
GCGCTGCTGTCTGGGCTTCCGGAGAAGCAGAGGTGGTGGGAAACAGGGGGCTAGGAGGCGACGGGGACGTGTGGGAGTATCGTGGCTGGATACCTCG
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