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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

MUGEST2003_all.Contig25261  (registered. 2007)
Contig Information
Length 3216 bp
Clones 96 Clones [Download: TSV  ,  FASTA ]
Wh_DPA20 Seed DPA20 3
Wh_EMC Dormant seed with cold treatment after water absorption 2
Wh_EMI Dormant seed with water absorption after breaking 2
Wh_GCPCDAM Anther at meiosis of DT4B CS wheat 17
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 9
Wh_KMP Shoot grown under continuous light 4
Wh_KMV Shoot grown with continuous light after cold treatment 1
Wh_PCDAM Anther at meiosis 32
Wh_RDr Root of dessiccated seed 5
Wh_SHC Shoot grown with cold treatment 2
Wh_VHS Shoot with heat shock treatment 19
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit hypothetical protein ZeamMp158 [Zea mays subsp. mays] >gi|40795104|gb|AAR91148.1| hypothetical protein [Zea mays]
Score 467
Evalue 2.11805e-44
Total Hit Count 243
Registered year 2007
Contig Sequence     [ Download ]
>MUGEST2003_all.Contig25261 
TTTTTTTTTTCATGTGCACTATCATCGACCGCAAACATCAAGACATGTGCGAGAAACATAACTCCAGCGATTTATCAATCAACTTCTCAAGGCTGCGGAA
GCAGTAACACACTCACATACGAAGGTACTAAACATATACATTGTCCCAAGCAAAATAGCACGAACTTCAGGTCTCTAGATATTATGCAGGCGCTGTTGTG
GCAGGCCACACACGACAGATACTAGGGTAAACAGAGGGTAGGGGGGAGGAACTGAAGCGCTTAGTCGAACAGACTGAAACCCATGTCTTCATCAGATTCT
TCCTTCTCTTCAACCTTCTCCTCCTTCTTTGACTCAGCAGCAGGTGCTGCGGCACCACCAGATGCAGCAGCTGGAGCTCCCACAGCAATGGCACCCCCAC
CTGAAGGCACAGCGGCAAACTTCTCCCTTCCAGATGCAATCACTTCTGTGATGTCCTTGCCTTTGAGTTCAGCAAGAAGGAACTCAAGCTTTTCTTCATC
AGCCTCAGCACCAACTGAGTCAAGGATGTTCTTGACGTCAGCGGCACTTGGGGAAGAGTTCCCGCCCAGGTAGGCGAGAAGGTAGGCTGCGATCAGCTTC
ATCGTGGAAACTAGGAAGCACCTCCGAGATGCGCAGGAGAAGACGCGAGGACGGCGGCGGAGCCTCGTGCCGAATTCGGCACGAGGCACCGAAAATGTCT
CAGGGCTCAAGTGATTCACCGAAGCGACGAGACCTTGAAAGCAGCTTTTTCAAGTGTCAGTAGCGGGACGTTCTGTCAATCGGGGAAGGTTTTTGGTGAC
AAGACCTGGAGATATCAGAAGTGAGAATGCTGACATGAGTAACGAGAAATCCTGTGAAAAACACGATCGCCTGCCAGTGGAAGGCTTTCTGCGTTCAGTC
AATCTACGCAGAGTGAATCGGTCCCTAAGGAACCCCCGAAAGGGCTGCCGTCATAGTCAAAATCTGAGTTTGATCCTGGCTCAGAAGGAACGCTAGCTAT
ATGCTTAACACATGCAAGTCGAACGTTGTTTTCGGGGAGCTGGGCAGAAGGAAAAGAGGCTCCTAGCTAAAGTTGTCTCGCCCTGCTTCAAAACTACAGG
GCGCGCGCTACGGCTTTGACCTAACGGCCTCCGTTTGCTGGAATCGGAATAGTTGAGAACAAAGTGGCGAACGGGTGCGTAACGCGTGGGAATCTGCCGA
ACAGTTCGGGCCAAATCCTGAAGAAAGCTCAAAAGCGCTGTTTGATGAGCCTGCGTAGTATTAGGTAGTTGGTCAGGTAAAGGCTGACCAAGCCAATGAT
GCTTAGCTGGTCTTTTCGGATGATCAGCCACACTGGGACTGAGACACGGCCCGGACTCCCACGGGGGGCAGCAGTGGGGAATCTTGGACAATGGGCGAAA
GCCCGATCCAGCAATATCGCGTGAGTGAAGAAGGGCAATGCCGCTTGTAAAGCTCTTTCGTCGAGTGCGCGATCATGACAGGACTCGAGGAAGAAGCCCC
GGCTAACTCCGTGCCAGCAGCCGCGGTAAGACGGGGGGGGCAAGTGTTCTTCGGAATGACTGGGCGTAAAGGGCACGTAGGCGGTGAATCGGGTTGAAAG
TGAAAGTCGCCAAAAAGTGGCGGAATGCTCTCGAAACCAATTCACTTGAGTGAGACAGAGGAGAGTGGAATTTCGTGTGTAGGGGTGAAATCCGTAGATC
TACGAAGGAACGCCAAAAGCGAAGGCAGCTCTCTGGGTCCCTACCGACGCTGGGGTGCGAAAGCATGGGGAGCGAACAGGATTAGATACCCTGGTAGTCC
ATGCCGTAAACGATGAGTGTTCGCCCTTGGTCTACGCGGATCAGGGGCCCAGCTAACGCGTGAAACACTCCGCCTGGGGAGTACGGTCGCAAGACCGAAA
CTCAAAGGAATTGACGGGGGCCTGCACAAGCGGTGGAGCATGTGGTTTAATTCGATACTACGCGCAAAACCTTACCAGCCCTTGACATATGAACAACAAA
ACCTGTCCCTTAACAGGATGGTACTGACTTTCATACAGGTGCTGCATGGCTGTCGTCAGCTCGTGTCGTGAGATGTTTGGTCAAGTCCTATAACGAGCGA
AACCCTCGTTTTGTGTTGCTGAGACATGCGCCTAAGGAGAAATTGCCACCGAGTGACGTGCCAGCGCTACTACTTGATTGAGTGCCAGCACGTAGCTGTG
CTTTCAGCAAGAATTTCACCATTGGGAGCCGGTGCCTTTCGAAGCACTTTCACGTGTGAACCGAAGTCGTCTTGCCCAAGACCCACGGAGACCTACCTAT
AGTGACGTCAAAGTACCAGTGAGCATGGAGGTTTGGTTGAAATTGGTTACGACGACGTCGAGTTGGCGGCGGAGGAAGACTCGGCATGAAGGCCAGAAAA
TGGTGTGGAACGTAGTGGTAATAGTACGCGCCCCGCTCCGAAACAAAGAAAAAGGTGCGTGCCGCACTCACGAGGGACTGCCAGTGAGATACTGGAGGAA
GGTGGGGATGACGTCAAGTCCGCATGGCCCTTATGGGCTGGGCCACACACGTGCTACAATGGCAATGACAATGGGAAGCAAGGCTGTAAGGCGGAGCGAA
TCCGGAAAGATTGCCTCAGTTCGGATTGTTCTCTGCAACTCGGGAACATGAAGTTGAAATCGCTAGTAATCGCGGATCAGCATGCCGCGGTGAATATGTA
CCCGGGCCCTGTACACACCGCCCGTCACACCCTGGGAATTGGTTTCGCCCGAAGCATCGGACCAATGATCACCCATGACTTCTGTGTACCACTAGTGCCA
CAAAGGCCTTTGGTGGTCTTATTGGCGCATACCACGGTGGGGTCTTCGACTGGGGTGAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGTGGCTGGATTG
AATCCTTCGCGATGGAAATGCCCTCGCCTACTTGACTAAACTAAGGACCTCAACGGTATAAACATGTAGATTTTCTACTTTTCCATTTTCCTTCTTGTTT
ATCAATCACCAATCAAGACAAACCGGGCACTACGGTGAGACGTGAAAACACCCGATCCCATTCCGACCTCGATATATATGTGGAATCGTCTTGCGCCATA
TGTACTGAAATTGTTCGGGAGACATGGTCAAAGCCCGGAGAAAGAGCAAGAAAACTAAAGAAAGCGTTAGCGCATTGGACTCGAAATCCAAATTGTGCTA
GCTGACAAAAAAAAAA
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