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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Wh_MS_all.Contig2592
Contig Information
Length 1005 bp
Tissue Seed DPA5 of DT3DL CS wheat
Clones 8 Clones [Download: CSV  ,  FASTA ]
whms10b20    whms7i18    whms14d20    whms19i02    rwhms10b20    rwhms7i18    rwhms14d20    rwhms19i02   
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os10g0377400 [Oryza sativa (japonica cultivar-group)] >gi|78708412|gb|ABB47387.1| Ras-related protein Rab11D, putative, expressed [Oryza sativa (japonica cultivar-group)] >gi|113639085|dbj|BAF26390.1| Os10g0377400 [Oryza sativa (japonica cultivar-group)] >gi|215767227|dbj|BAG99455.1| unnamed protein product [Oryza sativa Japonica Group] >gi|218184417|gb|EEC66844.1| hypothetical protein OsI_33317 [Oryza sativa Indica Group]
Score 1009
Evalue 1.4669e-107
Total Hit Count 500
Registered year 2003
Contig Sequence     [ Download ]
>Wh_MS_all.Contig2592
GCAGCGCTGCGCCCACGCGCACTTCACCTCCACGACCTACACGCCTCGCTCGCTCAGTCCTCCGGCTGCCGCCAACGCCGCCGTTCTGCACGAGCGAAGA
CGATGGCGAGCGGGGAGAAGGTGGACTATGTGTTTAAAGTGGTGCTGATCGGGGACTCGGCCGTCGGCAAGTCGCAGATCCTGGCGCGGTTCGCGCGCAA
CGAGTTCAGCCTCGACTCCAAGGCCACCATCGGTGTCGAGTTCCAGACGCGCACGCTCGTCATCGACCACAAGTCCGTCAAGGCCCAGATCTGGGACACC
GCCGGCCAGGAGAGGTACAGAGCTGTCACGAGCGCATATTACAGAGGCGCTTTGGGAGCTCTGCTAGTCTATGACATCACCAAGCGCCAGAGCTTTGACC
ACATACCTCGCTGGCTGGAGGAACTCCGGGGTCATGCAGACAAAAACATTGTCATCATGCTGGTTGGCAATAAGAGCGACCTTGAAGATGAGCGGGCTGT
TAGCACTGAGGATGCCAAAGAGTTTGCTGAGAAGGAGAACCTCTTCTTCCTGGAGACGTCCGCGCTGCAGGCCACCAATGTCGAAAGCGCCTTCCAGACT
GTCTTGTCAGAGATCTTCAAGATCCACAGCAAGAAGAACATTGTAACCGACCCAAAGGCCAATGGTGCTGCGCCGCCGCTGGCCGGCAAGAAGGTTCTTG
TCCCAGGCCCAGCACAGGAGATCCCAAAGAGCAAGTGCTGCAGTTCTATGTAATCTCTCTGCTACCAGATTTGTTGGATTTGTGTGTGTTTTGAGAATAT
TCACGCTGTCTGGATATAGATCCCTACTGAGATAGTCTTAGGTTTCAAGTATTGGTTCATTTGGTGAGACGGATGGGGTCGGTGGCAGAGCAAGATTTTG
CACTCATCTCCACTGACTATGAGGTTAGGGAGTGAGCAGATGAAGTCCCTTTTCATAGGTCCGAGCCGTGGGATTGATTATCAATTGCCGTGTATGACTC
AGAAC
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