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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

MUGEST2003_all.Contig21231  (registered. 2007)
Contig Information
Length 1416 bp
Clones 9 Clones [Download: TSV  ,  FASTA ]
Wh_EMI Dormant seed with water absorption after breaking 2
Wh_KMV Shoot grown with continuous light after cold treatment 2
Wh_VABA Shoot with ABA treatment 2
Wh_VHS Shoot with heat shock treatment 3
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os01g0588700 [Oryza sativa (japonica cultivar-group)] >gi|113532968|dbj|BAF05351.1| Os01g0588700 [Oryza sativa (japonica cultivar-group)] >gi|215701327|dbj|BAG92751.1| unnamed protein product [Oryza sativa Japonica Group]
Score 1325
Evalue 5.45931e-144
Total Hit Count 500
Registered year 2007
Contig Sequence     [ Download ]
>MUGEST2003_all.Contig21231 
GGCGCACCCAAATTCCGACCACTACCTTTGCGATTTGCGAGTTGCGGCTCTCAGGCGCCGCCCTCGAAACGCCACCAGGCCCTCGATCCGCCGCCTCCAA
CCTAGTGCTCCGACGAGCTTGCCGGCGGAGGAGCGATGGGTGAGCGGAAGGTGCTGAACAAGTACTACCCGCCGGACTTCGACCCGGCGAAGATCCCGCG
GCGGAAGCAGCCCAAGAACAAGCAGATCACTGTGCGCATGATGCTTCCCATGAGCATCCGCTGTGGCACTTGCGGGACGTACATCTACAAGGGCACCAAG
TTCAACTCGCGCAAGGAGGACTGCATCGGCGAGACATACTTGGGCATACAAATATTTAGGTTTTACTTCAAGTGTACTAGGTGCTCAGCTGAGATGACTT
TCAAAACAGACCCTCAGAATTCAGACTACACGGTGGAATCTGGGGCTAGTCGCAATTTTGAACCTTGGCGGAAAGAGGATGAGGTTGTGGACAAACAGAA
GAGAAAACGAGAAGAGGAGGAGATGGGCGATGCAATGAGAGCACTGGAGAACAGAGCAATGGATTCAAAGCAGGACATGGACATACTTGCTGCTTTAGAA
GAAATGCGGTCTATGAAGTCTAGACATGCTGGAGTCTCCGTTGACCAGATGCTTGAAATTTTGAAGCATTCCGCTCATCAGAAGGAGGAAAAAACAGTAG
CAGAACTAGATGAAGAAGACGAAGAACTCATCAAATCAATCACTTTTCGAAACTCGAAAGATTATGTTAAACGGATCGAAGACGATGATGACGATGATGA
AGATTTTGGTATACCAGGAAAGCCAAGTGTCATGTTAAAGATCAATGGATCTTCTGAATCAGTGTTAAATCCAACAGATGTCTTGACCAAAGCTAATGGA
CCTGAGAGTGCCAGTAAAGAAGGAAACAAGAGCTTTGCATCTAAGATGCCCAAATTCATAGTAAAACCAAAGCCCGCTGCTGCAACCGCAAATCCTCAGA
AGAAACAGAAGACTGAATCCACAGCTGTCCAAGATAACGGCAAAGCACCGGCCACCGAGGAAAAAAATGAAGCTTCAGAAGGGAAGAAGACCAATGTTCT
TCAGTCCCTCTGCCAGTATGATAGCGACGAAAGTGATTGACTGAAGACAACTCTTCTTGGAGTCGTAACTGCACTGGAGTAGACAAGCCCCTGCCTGGAA
CACGATCGTGTAACCCAGAACCCAAGCCTGTGTAAATTGTCTCCTCCCGCAAAGTCTCTGCCGCCAAATGTAAGTCCGTCGTGCTGAAAATCCGTGCCAG
CTAATATAGTCCAGAGACTCCAGATCTATGGACAATTTGAAGGCTTGGTTCCCGGAAGCAGCACTGAGATTATTCTTGTATTCGTGTTTTCCTCCTGTGA
GTTGATTTTTCGGTAC
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