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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Wh_OKCS_all.Contig2257
Contig Information
Length 1498 bp
Tissue Seed DPA5
Clones 6 Clones [Download: CSV  ,  FASTA ]
whok20i13    whok10a07    whok7h07    rwhok10a07    rwhok7h07    rwhok20i13   
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os01g0180800 [Oryza sativa (japonica cultivar-group)] >gi|13122421|dbj|BAB32902.1| putative heat shock protein [Oryza sativa Japonica Group] >gi|13161454|dbj|BAB33024.1| putative heat shock protein [Oryza sativa Japonica Group] >gi|113531741|dbj|BAF04124.1| Os01g0180800 [Oryza sativa (japonica cultivar-group)] >gi|125569279|gb|EAZ10794.1| hypothetical protein OsJ_000619 [Oryza sativa (japonica cultivar-group)]
Score 607
Evalue 1.06624e-60
Total Hit Count 500
Registered year 2003
Contig Sequence     [ Download ]
>Wh_OKCS_all.Contig2257 
TTTTTTTTTTGTTTCCGTAGTGACCAAAAATTTCTGAATCGCTATGGGCCACCGTAGATAAAAATTACAACGTTATGGACCATCGTCATTAAAAAAATAC
ACTGGAGACCATGGGTCACCAAAACCTCGACGAATGCCCTTACCCTGCATGCATCTGCCAAACGTCGTCAAAGAAAAGACCGCTTTTGAAGGGACAAAGA
CGTCTAGAAACACTGCAGAACTCTCCATGTTCTACTCATATCCTCACAACGTATGAAAACAACCATTCCTGCTAGTCTATTGCCCTAGCAGGCAAAAAGC
ACAAGAGAACCCAACCGATCATGGACGTAAAATCTCCCTGGTCGACAGTTCTTAAACCTGGGAAGGATCATCCTTATCAGTGTCCATTTGCTCAGCCGCA
TGCTCATCCTGAGCACCGTCGCTAGCTGGCTCAGCGGACTCGGCTCCATTTGATTGTTGTTCCGGTGTATGAGCCTCGGGTGATGGGGTTTCTGCTGGTG
GCGGGGTCTGGGGCTTTGGCGCTGGCCTTGGTTTGGTCATGATGGGTTTGCAGAACCTGTCAAGCGCTTCAGCCTTCTTCTTTATGTCAGAAACAAGTAG
GACGGGATTAGCATGCTTCGGTAGAGCATCTTGCTGCTGCTTTTTCTCCATTAGCCAGGTCTCTGCGGCCGAGCACTCATTAACGACCTTTTGTTTCTCT
GATATGTCTATGTGATCAAACTTTTGGTCAGCAGACAATGCAGCCTCTCTAAAACTGCGGATGCAGTACACCAATTGCTCAAGAGCTGGACCTCTTTCTG
TCCACTCTTTGTAGCGCATTTCGATAGGACCACCAAGCCTTTTCAGTTCTTCTAGTTTTGCAACATAGACTCCCTTGGGTCTCATCCTCACCATCTTCAT
ACAGCCAATCCTCAACCTCCTGAAGTTTAGCCATCAACCCTTCTATATCCTCCAACATGACAAAATCATTGTACTTCTCATGAATCTTGTTACGCATGTC
ATAAACATAAGCCTCGACTGAATTTTTCTTGTCCTTGGTTTCTTCCATCACTCTGTCCTGAAGAGCCATTTCATATTCTTTCTCAACAGCTTTCTCTAGC
TCAACAGTGCCCATCGCCCCATACACCATTTCGGCAACTGGAACATTTGTTTTCTTAACTTTCTTTTTTGATGGCTCAACCTTTGTGTCAGTATCCATTG
GAACAGTTTTTTCCTCAGAATCTTGTGCCCCGTTTTCAGCAGCACCCTCAGCAGGATCAGCAGCTCCTTTAGGTTCCTGCGTATGGTCACCAGCACTAGA
CGCAGGGTCCTGCGGTGCATCATCTGTCTCCATTCTAGTAGCATCCTTTGGCACCTCACTCGTAGATGAAACCGGAACTTCCACTTCCTCCTCTTCCAGC
ATCGTTGCTGATTCAAGAGACACTATCCCATGGATGTTGAGGCGAACTTTCACTTTCAGTTTAGCCTTCTCACCTTTGCTGGATGGAAAGGGCCGATC
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