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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

MUGEST2003_all.Contig25334  (registered. 2003)
Contig Information
Length 2107 bp
Clones 140 Clones [Download: TSV  ,  FASTA ]
Wh_CSEC Callus 2
Wh_EMC Dormant seed with cold treatment after water absorption 2
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 4
Wh_KMP Shoot grown under continuous light 4
Wh_KMV Shoot grown with continuous light after cold treatment 4
Wh_MS Seed DPA5 of DT3DL CS wheat 8
Wh_OKCS Seed DPA5 5
Wh_PCDAM Anther at meiosis 2
Wh_SHDr Shoot grown with dessication 4
Wh_V4816 Shoot grown under cold condition for 16days 14
Wh_V483 Shoot grown under cold condition for 3days 18
Wh_VABA Shoot with ABA treatment 21
Wh_VHS Shoot with heat shock treatment 22
Wh_VSCB Liquid cultured tissue 5
Wh_VWD Shoot grown with dessication 25
Homology (BLAST) Top Hit Os01g0869800 [Oryza sativa (japonica cultivar-group)] >gi|15408693|dbj|BAB64099.1| putative photosystem II subunit PsbS [Oryza sativa Japonica Group] >gi|20160872|dbj|BAB89811.1| putative photosystem II subunit PsbS [Oryza sativa Japonica Group] >gi|113534460|dbj|BAF06843.1| Os01g0869800 [Oryza sativa (japonica cultivar-group)] >gi|125528521|gb|EAY76635.1| hypothetical protein OsI_04589 [Oryza sativa Indica Group] >gi|125572786|gb|EAZ14301.1| hypothetical protein OsJ_004126 [Oryza sativa (japonica cultivar-group)] >gi|215701291|dbj|BAG92715.1| unnamed protein product [Oryza sativa Japonica Group] >gi|215737433|dbj|BAG96563.1| unnamed protein product [Oryza sativa Japonica Group] >gi|215764949|dbj|BAG86646.1| unnamed protein product [Oryza sativa Japonica Group]
Score 787
Evalue 1.17772e-82
Total Hit Count 287
Registered year 2003
Contig Sequence     [ Download ]
>MUGEST2003_all.Contig25334 
ATCTGGCTGCACCACGGCCGACTGTGCTGCTCCGCCGAGACCAGCTCCATCCCCAGCTGCATCTATTTGGGGTACGGCGGCGGCAGTGCGGCCGGCGGCA
GTGCGGCCGGCGGCGTCTTTCATAGCATAGCAAGATGTCCACCAATGGCGTCGAGCTCGATGGGGTGTGTGCTCCGCCCGCGCCATGGAACAACTGCGCC
TATCCAGTCGAGTCGCAGGATTCGATGAGCGTCCCAACCATGGCATTTGGCACCGGCGGCGATGCACAGCTAGTCGGGGATGCAGCTAGGGCCGAGGGTG
AGGATCGGGAAAGCCCCGGAGGAAAGGGAGATGAACCCAAATAGGAAATCAACTCTTGAATTGTCTCTGCGCGCTTATGCTGATAAGAAGGATGGCCCTG
TTCTCTGTCCAAGTATTGGAACAAGCTTTGACTCTATTGACGAGGCTTATGAGTTCTACAATCTTTATTCATGGGAATGTGGTTTTGGAGTTAGGCTCGC
GAAAAGTAGACTGAATGTCGAGAGGAAGAGATGCATGCAAGAGATCGTGTGTGCTTGTGCAGGCAAACCAATCAGGGAAAACAGCCACACCTGGACGAGC
GGCCACCCCCACAGCCACAGCCACAGAACGCGCGAAGCGATATCATCACGAGTGAGCGTCTAGGCGGGCATCCATGGCACAGTCGATGCTCATGTCCGGC
GTCAACGGCGTGGCCTCCGGCAGGAGCCTGCTGCAGGCGGCCCCGGCCGTCGTCGGCGTCCACGCCCCTTCTCGCGGCTCGCGCTCTCCTCCTCCTCGTC
GGCGGCAGCGTACTACAAGCACATGCCGTCCCTCTCCGTCCGGACCATGGCCCTGTTCGGCAAGAAGACCAAGGCCGCGCCGGCCAAGAAGGTCGTTGCC
CCCAAGCCCAAGACCGAGGACGGTATCTTCGGCACGTCCGGCGGGATCGGTTTCACCAAGGAGAACGAGCTCTTCGTCGGCCGTGTTGCCATGATTGGCT
TCGCCGCATCGATCTTGGGAGAGGCCATCACCGGCAAGGGCATCCTGTCCCAGCTGAACCTTGAGACCGGCATCCCGATCTACGAGGCGGAGCCCCTCCT
CCTCTTCTTCATCCTCTTTACCCTCCTCGGTGCCATCGGCGCGCTCGGAGACCGCGGCAGGTTCGTCGACGAGCAGCCCACCACCGGCCTCGACAAGGCC
GTCATCGCCCCCGGCAAAGGCTTCCGCTCCGCCCTCGGTCTCAGCGAGGGAGGGCCGCTGTTCGGGTTCACCAAGTCGAACGAGCTGTTCGTGGGGCGGC
TGGCGCAGCTGGGGATCGCCTTCTCCATCATCGGGGAGATCATCACGGGCAAGGGCGCGCTGGCGCAGCTCAACATCGAGACCGGGGTGCCCATCAGCGA
GATCGAGCCGCTCGTGCTCTTCAACGTCGTCTTCTTCTTCATCGCCGCCATCAACCCCGGCACCGGCAAGTTCATCAGCGGCGAGGAGGACGACTAGATC
ACGCGCGAGTGCTTTTTGGCCATTAATTGTACGTCCGTCCGTCCGTGCTTTGCTTGTTTGTTGTGTAACGTGAGACCCTTGGGGTGTACTTAGGTGTAAG
AAGTTGGTCGTTGCCTTATGAAAAACAAGAGCTAGCAGCTAATTTGCCATGCAAAAACGGCGGCGGCGGCAGCGAAGAAGAAGAAGAGAAGAAGAAGAAA
GATGATCTACGACGTGAACTCCCCCCTGTTCCGCTCCTTCCTCAGCCAGAAGGGCGGCGCGTCCTCCGACAAGAGGAAAATGGAAGAGCAGAAGCCGAAA
GACCAGAGGTTCAAGGCCAACGAGAACAAGCCTGTAATGAACGAATGAGCATCGCCTGGACAGTCCGGTGCCTGCAAGGCCTAGCTGCCAATCATGTGAC
ACTCCTATGTTAAAATGAGTGGTGTGAACATCTGCTTGGTCGTTCTGAAAACTATCCAAGTATCCAGTACTGTGTTTTAAGTTCCTATATATCTGAACTG
CATGCCTGGAATGATAAATTAGGAGATTTTATCTTGTGATGTCTTCTCATGGAGCATTCAAGTTTTGGAATCCACTTCCAGTTCCATATGGTGATTTAAA
AAAAAAA
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