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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Wh_EMC_all.Contig2059
Contig Information
Length 918 bp
Tissue Dormant seed with cold treatment after water absorption
Clones 6 Clones [Download: CSV  ,  FASTA ]
whec13l23    whec17j06    whec17j17    rwhec13l23    rwhec17j06    rwhec17j17   
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os09g0397300 [Oryza sativa (japonica cultivar-group)] >gi|50252610|dbj|BAD28781.1| putative trehalose-6-phosphate synthase/phosphatase [Oryza sativa Japonica Group] >gi|113631337|dbj|BAF25018.1| Os09g0397300 [Oryza sativa (japonica cultivar-group)]
Score 929
Evalue 2.39607e-98
Total Hit Count 500
Registered year 2003
Contig Sequence     [ Download ]
>Wh_EMC_all.Contig2059 
ACAGACATGTTGAACAGCCTTTGTCGCGATGAGAAGAACATGGTCTTAATCGCAAGCACAAAGACCCGGGAGACCTTAAGTGAATGGTTCTCAGCATGTG
AGGACCTAGGCCTTGCTGCTGAGCATGGCTACTTCATCAGGCTGGAAAGAGATGCAGAATGGGAGACATGCGGCCTGTCAACAGACTTCAGCTGGAAGCA
AATCGCGGAGCCGGTGATGAAGACCTACACCGAGACAACGGACGGGTCGATCATCGAGGACAAGGAGACAGCAATCGTGTGGTGCTACGAGGACGCGGAC
CATGATTTTGGATCTTGCCAGGCCAAGGAGCTCCATGATCACCTGGAGAGTGTCCTCTCCAACGAGCCGGTATCAGTCAAAGCTGACCTGCACTATGTTG
AGGTGAAGCCACAGGGTGTGAGCAAGGGCCTGGTGGCGAAGCGGATGCTGTCGACAATGCAGGAGCTGGGGCTCCAGCCCGACTTCATCCTCTGCGTCGG
GGACGACCGCTCCGACGAGGACATGTTCGAGGTGATCACCACCGCGGTGGACGGCCCCTACCTGAGCCCTTCCGCGACGGTCTTCGCCTGCACCATCGGC
CAAAAGCCCAGCAAGGCCAAGTACTACCTGGATGAGCCCGCCGACATCAAGCGCATGATCCGGGCCCTCGCGAGCGTCTCTGACCAGGAGCTGGCGATGG
AGGAGGGCGAAGACCCTCCTTACCCTTTCCTCGCCGGCGACGGCACCAGCAGCGACGACACCTGGCTGGACTGAGGGGGGAAGCCGGCAGAGACGACCAG
CAGCAGCGCAGCCTCCGGCCTGAATAAGACAGCATAATGGACGTAAACGGCACCATAGTTGTGTTTCTGCTTGGTTGTTGTTCTGCTTGTTTCGCCCGTT
GTGTATATAGACTCCGTG
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