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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig27645  (registered. 2012)
Contig Information
Length 1506 bp
Clones alternative view 33 Clones [Download: TSV  ,  FASTA ]
Wh_f Spike at flowering date 1
Wh_r Root 2
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 1
Wh_KMP Shoot grown under continuous light 1
Wh_OKCS Seed DPA5 5
Wh_V4816 Shoot grown under cold condition for 16days 2
Wh_VSCB Liquid cultured tissue 1
WH_XJ Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 1
WH_XN Leaves, plant was grown at constant 23℃ 2
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23℃ ) 3
WH_XT Roots, 18 day old plants were grown hydroponically 2
WH_SP 2
WH_XB Root 3
WH_XD Root, treated at 50 microM Al for 6h 3
WH_XF Seedling, infected with leaf rust 2
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|115434904|ref|NP_001042210.1|| Os01g0180800 [Oryza sativa (japonica cultivar-group)]
Score 561
Evalue 6.00E-158
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig27645 
TTTTTTTTTTGGAATTGAAGAAAGCTCTTAATAATAATATTGTTTCCGTAGTGACCAAAAATTTCTGAATCGCTATGGGCCACCGTAGATAAAAATTACA
ACGTTATGGACCATCGTCATTAAAAAAATACACTGGAGACCATGGGTCACCAAAACCTCGACGAATGCCCTTACCCTGCATGCATCTGCCAAACGTCGTC
AAAGAAAAGACCGCTTTTGAAGGGACAAAGACGTCTAGAAACACTGCAGAACTCTCCATGTTCTACTCATATCCTCACAACGTATGAAAACAACCATTCC
TGCTAGTCTATTGCCCTAGCAGGCAAAAAGCACAAGAGAACCCAACCGATCATGGACGTAAAATCTCCCTGGTCGACAGTTCTTAAACCTGGGAAGGATC
ATCCTTATCAGTGTCCATTTGCTCAGCCGCATGCTCATCCTGAGCACCGTCGCTAGCTGGCTCAGCGGACTCGGCTCCATTTGATTGTTGTTCCGGTGTA
TGAGCCTCGGGTGATGGGGTTTCTGCTGGTGGCGGGGTCTGGGGCTTTGGCGCTGGCCTTGGTTTGGTCATGATGGGTTTGCAGAACCTGTCAAGCGCTT
CAGCCTTCTTCTTTATGTCAGAAACAAGTAGGACGGGATTAGCATGCTTCGGTAGAGCATCTTGCTGCTGCTTTTTCTCCATTAGCCAGGTCTCTGCGGC
CGAGCACTCATTAACGACCTTTTGTTTCTCTGATATGTCTATGTGATCAAACTTTTGGTCAGCAGACAATGCAGCCTCTCTAAAACTGCGGATGCAGTAC
ACCAATTGCTCAAGAGCTGGACCTCTTTCTGTCCACTCTTTGTAGCGCATTTCGATAGGACCACCAAGCCTTTTCAGTTCTTCTAGTTTTGCAACATAGA
CTCCCTTGGTCTCATCCTCACCATCTTCATACAGCCAATCCTCAACCTCCTGAAGTTTAGCCATCAACCCTTCTATATCCTCCAACATGACAAAATCATT
GTACTTCTCATGAATCTTGTTACGCATGTCATAAACATAAGCCTCGACTGAATTTTTCTTGTCCTTGGTTTCTTCCATCACTCTGTCCTGAAGAGCCATT
TCATATTCTTTCTCAACAGCTTTCTCTAGCTCAACAGTGCCCATCGCCCCATACACCATTTCGGCAACTGGAACATTTGTTTTCTTAACTTTCTTTTTTG
ATGGCTCAACCTTTGTGTCAGTATCCATTGGAACAGTTTTTTCCTCAGAATCTTGTGCCCCGTTTTCAGCAGCACCCTCAGCAGGATCAGCAGCTCCTTT
AGGTTCCTGCGTATGGTCACCAGCACTAGACGCAGGGTCCTGCGGTGCATCATCTGTCTCCATTCTAGTAGCATCCTTTGGCACCTCACTCGTAGATGAA
ACCGGAACTTCCACTTCCTCCTCTTCCAGCATCGTTGCTGATTCAAGAGACACTATCCCATGGATGTTGAGGCGAACTTTCACTTTCAGTTTAGCCTTCT
CACCTT
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