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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig1949  (registered. 2012)
Contig Information
Length 795 bp
Clones alternative view 14 Clones [Download: TSV  ,  FASTA ]
Wh_f Spike at flowering date 1
Wh_h Spike at heading date 1
Wh_r Root 1
Wh_EMI Dormant seed with water absorption after breaking 1
Wh_RDr Root of dessiccated seed 1
Wh_V4816 Shoot grown under cold condition for 16days 3
Wh_VWD Shoot grown with dessication 1
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 1
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 1
WH_XR Roots, 18 day old plants were grown hydroponically 2
WH_XC Root, treated at 50 microM Al for 6h 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|226510248|ref|NP_001150653.1|| succinyl-CoA ligase beta-chain [Zea mays]
Score 376
Evalue 2.00E-102
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig1949 
AGTGGCTGCTCAATTTTGTGCCCATATAGGTTTATTAACACAAAGATCACAAGTTTGAAGGAAAACTCAAAGTGGAATCACTCCACTTCAAAAAAAATAT
ACTTCAAGATTTCGGCCCCCAAAATCACCAAGAGAGCACCACTCCTCTTGTACCAGTGAAAACAGAACTTTAGACTGATATGGTACAATCATTAATCATT
TGACTGATGCTTTTACAGCCTTCTCTGCAGCATCATCAAGATCCTCTGCAGTGATCAATGTCATTCCACTTTCCTTAAGAATCCTTTTCCCTTGGTCTAC
ATTGGTGCCTTCTAGCCGAACAACAACAGGGACCTTAAGATCAACCTGTTTAGCTGCATTCACTATTCCACTTGCTATCACGTCACATTTCATGATACCT
CCAAAAATGTTCACTAGAATTGCCTTCACTCTATCGTCTGAAGTCAATATCTTAAATGCTTCCACAACCTGTCCCTCGGATGCACTCCCACCAACATCAA
GAAAATTGGCAGGTGTACCACCATGCAGCTTAATGATGTCCATCGTAGCCATTGCCAATCCTGCACCATTCACCATGCAACCAATCTCTCCATCAAGCCC
GATGTAGTTCAAATCTGCTTTAGCAGCAGCCACCTCTCTGGGGTCCTCCTGTGTTGTATCACGCAGTGCAAATATTTCTTTCTGCCTAAACGCAGCATTA
TCATCGAAGTTCAACTTTGCATCAGCAGCAACTAGCTTTTTATCAGCTGTCTCGGCAAGANNNNTTATCTCCAGCATTGTGCAGTCGGTCTTGCA
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