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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig24152  (registered. 2012)
Contig Information
Length 910 bp
Clones alternative view 88 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 2
Wh_f Spike at flowering date 5
Wh_h Spike at heading date 1
Wh_oh Pistil at heading date 1
Wh_yd Spikelet at late flowering 2
Wh_CSEC Callus 1
Wh_DPA20 Seed DPA20 2
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 1
Wh_KMP Shoot grown under continuous light 1
Wh_KMV Shoot grown with continuous light after cold treatment 1
Wh_MS Seed DPA5 of DT3DL CS wheat 1
Wh_OKCS Seed DPA5 4
Wh_PCDAM Anther at meiosis 4
Wh_RDr Root of dessiccated seed 1
Wh_SHC Shoot grown with cold treatment 1
Wh_SHDr Shoot grown with dessication 1
Wh_V483 Shoot grown under cold condition for 3days 1
Wh_VABA Shoot with ABA treatment 2
Wh_VSCB Liquid cultured tissue 2
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 1
WH_XJ Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 1
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 3
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 1
WH_XN Leaves, plant was grown at constant 23Ž 4
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 3
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 6
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 2
WH_XR Roots, 18 day old plants were grown hydroponically 3
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 2
WH_XT Roots, 18 day old plants were grown hydroponically 3
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 1
WH_SP 1
WH_XD Root, treated at 50 microM Al for 6h 4
WH_XE Seedling, infected with leaf rust 8
WH_XF Seedling, infected with leaf rust 3
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 3
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 4
WH_XY Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|151935411|gb|ABS18744.1|| ubiqutin ligase-like protein [Oryza sativa Japonica Group]
Score 358
Evalue 5.00E-97
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig24152 
TTTTTTTTTTCAAACGTAAAGGACTGAGCACAGAGGTAATCAAGTTTTACATCAACCAGAAAACATGTACCATCAAATGCATCAGAAAGATAGCAAGAAA
CCACAGTACAACACAACTGGCAAGACAAACAGAATTATGGACCGACTCCAGGGCTCACTTATTCTTAAGTTCATCAAAGCTTCCGCACACCAGCAGAAGT
TTGCAGATACAAACGATAACACTGCATCACAGTATATGGTATACAAACAAAGACAGTTCAGGCATCAACGGACACAGACCAGACTCCATTGGAGGACACC
GAGGACAACGAGACTTGTGAACCCAGAGACAGAAGCAGATCCATGGCCAGGAGCTTACTGGCCACCGCGCAGACGGAGCACCAAGTGAAGTGTGGACTCC
TTCTGGATGTTGTAGTCCGCCAAAGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCCTGGA
TCTTGGCCTTGACGTTGTCGATGGTGTCAGAGGACTCGACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCATGCCACCACGGAG
CCTGAGCACCAGGTGGAGTGTGGATTCCTTCTGGATGTTGTAGTCAGCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAAATGAGACGCTGCTGG
TCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAGGACTCAACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCT
TGACGAAGATCTGCATGCCACCACGGAGTCTGAGCACCAGGTGGAGTGTGGATTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGGCCATCCTCGAGCTG
CTTGCCAGCG
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