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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

MUGEST2003_all.Contig3896  (registered. 2007)
Contig Information
Length 850 bp
Clones 2 Clones [Download: TSV  ,  FASTA ]
Wh_EMC Dormant seed with cold treatment after water absorption 1
Wh_OKCS Seed DPA5 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os02g0550300 [Oryza sativa (japonica cultivar-group)] >gi|113536624|dbj|BAF09007.1| Os02g0550300 [Oryza sativa (japonica cultivar-group)] >gi|125582468|gb|EAZ23399.1| hypothetical protein OsJ_006882 [Oryza sativa (japonica cultivar-group)]
Score 624
Evalue 4.88533e-63
Total Hit Count 24
Registered year 2007
Contig Sequence     [ Download ]
>MUGEST2003_all.Contig3896 
CAGTCAATAACTTCACATGGACATAAACTAAATAACTTCACATGACATGAAATCGCTAAACAGAGGAGCTAGTAACTGCCAGGTCAGACAAGGGGAGGTC
AAAACTAAGGCATGTGAAATCCAAAATCAGAATATCCTCATTCCAGGTTCCCCTTTCTACAACATCCATTCTATTCTTCTGCTACAGGAAATCCTTAAGT
TTAGTCTGGAGCCGGAAACTACTACACATTCATTCTTGATGGGCTCGTGTTGGCTGGCGGTCTTCCTCGCCTTGCCCAGAGAAAAACATTAGAACAACAA
GCACAGCCACCAATAAGAGGAGGATGTACAACGCATTCACACCAAGCAGCGTTGGGAAACGTCTGCCAAATGTCTTCTTTATTGTTCTTCCAGCTCTATA
TGCCTCGAGGAAACGACTAATTTGGGATCCATGATCACCTTCTTCCAACTTCTCTAAACCCTCAACCACTTCATACTTCTCATCTTTGTCCCAGACTACC
AACTTTGGCAGCTGTGAGCTCTTAGAATCATGGAAAGGCTCGGTGAATTCCTCCCATTGGTTGACTCCCACATATCCAAACACTAGGTCATGGTTTGCAT
TGGCTGCAGACCTTAAAATTTTTATCAACCGCATGGAAGTTTCATCAGAATCATCCTGCAGAACTGCAAGGACAACTTTCCTATCGTCATCTTTTAACAT
CTTAACAGTCTCTGCATTGATGGGCACAGTCATCGGAAGCAGGGATTGCCGTATAAAATCCTCCAAGAAGGTTCCTTCAAAGGGGCCATAAAAAACACTC
TGCTCGTTATATTTTGGGTTGAGCGAAACCAATGCTGGAATCTTGTCAAA
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