Home About update informationSite map Contact Us
Japanese | English  
Genome / Development
cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig6930  (registered. 2012)
Contig Information
Length 875 bp
Clones alternative view 125 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 10
Wh_dL Crown of seedling 6
Wh_e Seed DPA10 3
Wh_oh Pistil at heading date 10
Wh_r Root 1
Wh_yd Spikelet at late flowering 4
Wh_CSEC Callus 4
Wh_EM Dormant seed with water absorption 2
Wh_EMI Dormant seed with water absorption after breaking 4
Wh_KMV Shoot grown with continuous light after cold treatment 2
Wh_MS Seed DPA5 of DT3DL CS wheat 2
Wh_OKCS Seed DPA5 3
Wh_SHC Shoot grown with cold treatment 3
Wh_V4816 Shoot grown under cold condition for 16days 2
Wh_V483 Shoot grown under cold condition for 3days 2
Wh_VSCB Liquid cultured tissue 4
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27℃ ) 8
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 2
WH_XT Roots, 18 day old plants were grown hydroponically 1
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 2
WH_SP 3
WH_XA Root 13
WH_XB Root 8
WH_XC Root, treated at 50 microM Al for 6h 13
WH_XD Root, treated at 50 microM Al for 6h 4
WH_XE Seedling, infected with leaf rust 4
WH_XF Seedling, infected with leaf rust 4
WH_XY Leaves, seedling were infercted with blast strain Pr58 for 4 days (27℃ ) 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|226531716|ref|NP_001149240.1|| 40S ribosomal protein S9 [Zea mays]
Score 377
Evalue 7.00E-103
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig6930 
CCACCCCAACTTTTTTTTTTGAAGGAGGATTCCAGGTCATAGTCAAGAACATTTTTAGATAACTTTCATCACGACCAAATAGCTCCAAACATAAAGCAGT
GCATACATGCTAACAACAGTGATAAAGTGACAAAATGACAAGAGGATAACCCATGAAAGTCTCAGGCCTCTCAGCTAAAGTACTCATAACACCAACATTT
GATAAATATAAGGTGATAGCTACTAGTTCCTCATTCCTCTTCCTCGTCACCACCGGCGTCACCGCCACCACTTGCCTTCTTCTGGTTCTTTCTCTTCACC
CTGCCTGCAGGGCCTCCACCGAATGGACTTGTCAGTGAGAAGTCGATGTGCTTCTCAGATTCAACCCTCACCATGAACGAGGGGACATTGACGATCTGCC
TGCCAACCCTGATGTGGCGTTGCCTGATCAAGACACGGGCATGGTGGATGGATTTTGCCATGCCAGCCTTGAAGACAAGAGTCTGAAGGCGCCTTGCAAG
GAAGTTCTCAGCAGTCAGGGCAAGGACGTAATCAAGCTTATCCTGGCCCTCAGCAAGGAGACCATAGCGGTTCATGCGACGGAGAAGGGCCGCGCCCTCA
AAGATACGGCGGGGATTTTTCTCATCCAGTGTGAGCAAGTGTCTTGCAGCATTACGAATCCTGCTCAGTGCATACTGAACCCTCCAGAGCTCACGCTTGC
ACCTCAGTCCATATTCACCGACCAGCTTTAGTTCTGCATCAAGACGCTCCTTCTCATAAGGACGCCTTGGTTTCTTGAATGTCTTACCATAGTTGCGGTA
GAAGTTGACGTGCACCATGGCTGGAGCTCTCTCCTCTTTCTTCCGCTGCCGCCGCCGCCGCCGCCGCTCTGTGGT
page-top