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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig3683  (registered. 2012)
Contig Information
Length 1265 bp
Clones alternative view 56 Clones [Download: TSV  ,  FASTA ]
Wh_oh Pistil at heading date 3
Wh_CSEC Callus 1
Wh_DPA20 Seed DPA20 3
Wh_PCDAM Anther at meiosis 1
Wh_RDr Root of dessiccated seed 3
Wh_SHC Shoot grown with cold treatment 4
Wh_SHDr Shoot grown with dessication 1
Wh_V483 Shoot grown under cold condition for 3days 2
WH_XJ Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 6
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 4
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23℃ ) 4
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 3
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 3
WH_XA Root 4
WH_XB Root 2
WH_XC Root, treated at 50 microM Al for 6h 2
WH_XD Root, treated at 50 microM Al for 6h 6
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 2
WH_XY Leaves, seedling were infercted with blast strain Pr58 for 4 days (27℃ ) 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|242081853|ref|XP_002445695.1|| hypothetical protein SORBIDRAFT_07g024320 [Sorghum bicolor]
Score 565
Evalue 5.00E-159
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig3683 
TTTTTTTTTTCATATTTTCAACTAAAATCCACCAAGAATTTTATCAGGGAAGACCTCATTTGGAACCCAGTTCCCTTTGGTCTTGTTCGTTTGGCATGAA
ATTCTGCCTTGCCAACTAGAAGCAGAGATATACGTATAACCTAAAAGAATGTAGAACCAGAGATGCTACTAAATTTATTCGGATTCTGCCATAGTGGTCA
CAGCAACACCATCAAACTCCAATGAAAAATCGAATCACACTTCTGAACTAGGAACTAGGAAGCATCGGCAGGGGAGGGACAAACACAAAATTTACACGCG
TAGAATAGATAAGAGGAATCTTCAGATCTTGGTGGCGAAATCAAGGCCTTCCTTGCCGAGCGCCTCCACGTCGGCCACCGGCGGCTGGGCCCTGGCGACC
TTGGCGATGGCCTGATTCTCGTCGGCGGAGCCACCCTCTAGGAACACACCGATGACCTTGCCGTCCTTGACCCAGTAGGTGCCGAACTTGGGCTTAGGCG
CCGCTGGGTCGTTGTCCCCGAACAGCACCGTCTCGCCAACGTTGTCGCCGTAGAACTGCCACGCGACGTCGAACGACCTCGAGTAGAAGTAGGGCAGGTA
GTCGTACTCCGCCACGGACTCGCCGGACTCCTTGGCCTTGATCGCCTTTACTGCCTGCTCGGCTGATTTCCGAGCATGGTCGACGTGCTCCACTCTCCTC
GGCTCGTCGTACAGCTTCATGGGGAAAGTCGCCACATCACCGATGGCATATACACCAGCGACGCTTGTTTCGAAGAATGTGTCAGTCTTGAGTCCACCCT
TCTCCTCTTCAACTTGGCCTTTGAAGAGGCCTGTCAGCGGCCTGCCACCGACTCCGACGATGACAATGTCCGCATCCAGTACTCTTCCATCCTTCAGCTT
CACCACACTAACATCTCCATTGGCATCAGCATCAAAACCACTGGCCACAGTACCCTTCACGATATTGATTCCTTTGCTAGCGTAGTAACCCTCGTAGAAA
TGAGCAATGCCGGCAGTGAAGAGACGGGGCATGCACCACGGCTCTGGGTACACCATAGTGACATCGAAATTGTTGATCTTCAGTGCTGCGCTGAGCTCAA
GTCCTATGTAGCCACCTCCAACAACGACGGCCTTCCCATCCTTCTTTGCTTGCATAGCTGCGACCAACTTGTCGGCGTCATCAATTTCCCTTAGATACAA
TATGTTGTTTGATTCTGCTCCTTGAACGCCAAAGTCAATGAGCTTTATGGTCGAGGAGCCAGTGG
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