Home About update informationSite map Contact Us
Japanese | English  
Genome / Development
cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

MUGEST2003_all.Contig21318  (registered. 2007)
Contig Information
Length 1411 bp
Clones 10 Clones [Download: TSV  ,  FASTA ]
Wh_EM Dormant seed with water absorption 1
Wh_OKCS Seed DPA5 2
Wh_SHC Shoot grown with cold treatment 2
Wh_V4816 Shoot grown under cold condition for 16days 1
Wh_V483 Shoot grown under cold condition for 3days 1
Wh_VSCB Liquid cultured tissue 2
Wh_VWD Shoot grown with dessication 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os09g0527900 [Oryza sativa (japonica cultivar-group)] >gi|52077327|dbj|BAD46368.1| unknown protein [Oryza sativa Japonica Group] >gi|113631966|dbj|BAF25647.1| Os09g0527900 [Oryza sativa (japonica cultivar-group)] >gi|215768601|dbj|BAH00830.1| unnamed protein product [Oryza sativa Japonica Group] >gi|218202491|gb|EEC84918.1| hypothetical protein OsI_32118 [Oryza sativa Indica Group]
Score 907
Evalue 1.601e-95
Total Hit Count 500
Registered year 2007
Contig Sequence     [ Download ]
>MUGEST2003_all.Contig21318 
TTTTTTTTTTCAACATCTTAGTTCTGACATTCACAGCAGTTGCCATATATAGCAGTTCCAGTACACAAAATGAGAGATCTATTATTTCTTTGTACAGTCC
CTGATAGCATACAACAGAAATCCGCAACACAGCGTCTAGTGCATGCCATGCTGAATACAGATACAGTCGTTAGCTTCGTCTCTATTCGAAAACAACACAC
ATTCTAAGGTCCCTGCAACGATACATTTAGCCCGGCCACTAAGGCTAAAGCTAATTCAAGCTCCCAGCGCGGAAGAAATGTTTATAACAGCAACCGAAGC
AATTTACATTCCGAGATTCCGACATTCACTTGTCGGCAGCTCCATCGTAATTGCATGTTGGCACCACTCCTGAAGAGTCATGGTTGTTGTTGTGGCTATG
ATCCACTCCATGAGTCTGGGAACTTGAACCTTGCCCATTATTACGAGCTGGCCTCATATTAAGATCAAACATTTTTGAATCAATGGCACCCTGGCCATTG
CAATTGCCATCTGAGGCCGGATCATAGGCATTGTGGTGGTGGTTCACCATTTGCTCCTTTGGTACGGAATGAGCGTTATTTTGGTCCCTTGGGTTTTCAG
AGTCCATCTGTTGCATGGCTACATCGTCCATATGCCCTGGTTTATCTCCTGGAAATTCGACTCGTTGTCTTAGCAGCAAGTATCTTCCATGGGTTCGTTT
CCCACCAACATGAACAGCCATATCACAGCTCAGGCAAAGTGATGTACCATCTATGTCACAGTAGAAGAAAGCAGGAGAACTTTCACATATATCACAGCGT
ATTAATTTATTAGGGTCCGCAAGCCCAACCCTTACATGCCGACTAGCAAGCTTGTTACACATATGTACCTTCTCGTCGCAGGGACGGCAGAGGGCGGCCT
CGTCGGCCGCGCAGAAGAGCACCGCCACCGCGCTCTCGCACACATCGCAGATCGTCCTCATCCCGCCGCCGTTGGTGGTGCCCAAGCATATGCCAAATCA
GATAAACTGATTGGTTTCATAAAGAAGCAAGCGGAGGCAAACAAACTGTATGGAGCCATATGTGCCTCCCCAGCAATTGCCCTTGAGCCACATGGCCTGC
TGAAGGGAAAGAAGGCTACATCCTATCCTGCTATGTGGAGCAAACTCACGGACCAAAGCGAATGCAAGAACAGAGTCGTTGTCGATGGCAACCTGATCAC
TAGCCAAGGTCCAGGCACTTCCATGGAATTCTCGCTTGCCATCGTGGAGAAGCTCTTTGGCAGGGAAAGGGCCCTCGAGCTGGCCAAATCAATGGTTTTC
GTGTGAGTTCTGTTGCTACTAGAGTCACACTGCTTGTGAATATACGAGGGGATGCTGTGTTAGCTGGTGGTTTTTATTTCTTATATACTACAATAACGCA
GCAGCTCGTAA
page-top