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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig14643  (registered. 2012)
Contig Information
Length 990 bp
Clones alternative view 118 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 2
Wh_dL Crown of seedling 4
Wh_e Seed DPA10 2
Wh_f Spike at flowering date 1
Wh_h Spike at heading date 6
Wh_oh Pistil at heading date 1
Wh_r Root 5
Wh_yd Spikelet at late flowering 6
Wh_CSEC Callus 7
Wh_EM Dormant seed with water absorption 3
Wh_EMI Dormant seed with water absorption after breaking 5
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 5
Wh_KMP Shoot grown under continuous light 2
Wh_KMV Shoot grown with continuous light after cold treatment 1
Wh_MS Seed DPA5 of DT3DL CS wheat 1
Wh_OKCS Seed DPA5 5
Wh_PCDAM Anther at meiosis 2
Wh_SHC Shoot grown with cold treatment 6
Wh_V4816 Shoot grown under cold condition for 16days 2
Wh_V483 Shoot grown under cold condition for 3days 2
Wh_VHS Shoot with heat shock treatment 3
Wh_VSCB Liquid cultured tissue 2
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 2
WH_XJ Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 1
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 1
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 2
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 1
WH_XN Leaves, plant was grown at constant 23Ž 4
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 2
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 2
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 3
WH_CA 1
WH_SP 3
WH_XA Root 7
WH_XB Root 6
WH_XC Root, treated at 50 microM Al for 6h 6
WH_XD Root, treated at 50 microM Al for 6h 1
WH_XE Seedling, infected with leaf rust 1
WH_XF Seedling, infected with leaf rust 1
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|115452901|ref|NP_001050051.1|| Os03g0337800 [Oryza sativa (japonica cultivar-group)]
Score 386
Evalue 2.00E-105
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig14643 
ATAATATGACAAAATCCTCAACCGAAAGTATCAACCCTCCAGAGAAACTGTGAACGTCCCAGGCAAAATTACCATCACAGTAGGTCCAGAATTACCACGA
CGAATTAATCATCACAGCACGGAAATTTGCACGCACATTTTTTTTTTAACTAGGTTCAAAAGCATAATATAATACCGTGAACCCAAATGTTTTAACAAAC
TCTGCATCCAACAGAATAAACACGATATGATATTTAAGGTATCTGACACGCTGACACAAACAAGATATTGGACAGGAAACAGTTCTGAACTTCTGATGTT
CCAAAATTAGGCTAACCCTTCATAGTACCAGAAAGCTAAAGCTTCATGTCAGAACTTCACTTCTTGGCCTTCTTTGGTGCCGCAGCTGGAGCTGCAGCCG
CTGGTGCTGGTGCATGATCTCTCGGGCCCTGGGCCAATCTCTCCTCCCTCCTGGCAATCTTCCTCTCCCTGCTTGCCTTGCTCTTGGCGCGCTTGGCCTC
AAACTGGTCAGAGAGGGTCTTCTCTCTTGCCTTCTCAGCCTTGGACTTGTGGATACTCTCCATGAGGACCCTCTTGTTCTTGAACATGTTACCTTTGACC
TTCAGGTACATGTCATGGTACATGTGCTTGTCGATCTTCTTGGCCTCACGGTACTTGCGCAGAAGGCGCCTCAGGACGCGCATCCTCCGCATCCACAGGA
TCTTGGTGGGGAGCCTAGCCTCCCTGGTACCCCTACGCTTACCATATCCAGAGTGACGGCCCTTCTGCTTGGCCTCATGTGCCCTCCTTGCACGAGACCT
GGAGTGGATCTTCTGAGGCTTCCTGATGATGAAACCATCCTTTACCAGCTTCCGGATGTTCTGCCGGGAGTTGGCCATGGAGATCTCGTTGACCTCATTG
GGGTCGAGCCAGACCTTGCCCTTGCCGCATTTGAGGACGCTCGAGGCCAGGCGCTTCTGCAGCTTCAGCGACACCATCTTCGCCGCCGCT
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