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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig1087  (registered. 2012)
Contig Information
Length 1273 bp
Clones alternative view 98 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 3
Wh_e Seed DPA10 2
Wh_oh Pistil at heading date 2
Wh_r Root 2
Wh_yd Spikelet at late flowering 3
Wh_CSEC Callus 2
Wh_EM Dormant seed with water absorption 6
Wh_EMI Dormant seed with water absorption after breaking 3
Wh_KMP Shoot grown under continuous light 3
Wh_RDr Root of dessiccated seed 1
Wh_SHDr Shoot grown with dessication 2
Wh_VABA Shoot with ABA treatment 1
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 4
WH_XJ Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 2
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 4
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 1
WH_XN Leaves, plant was grown at constant 23Ž 4
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 4
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 1
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 2
WH_XT Roots, 18 day old plants were grown hydroponically 3
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 2
WH_SP 2
WH_XA Root 4
WH_XB Root 16
WH_XC Root, treated at 50 microM Al for 6h 3
WH_XD Root, treated at 50 microM Al for 6h 2
WH_XE Seedling, infected with leaf rust 2
WH_XF Seedling, infected with leaf rust 7
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 3
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|222617767|gb|EEE53899.1|| hypothetical protein OsJ_00434 [Oryza sativa Japonica Group]
Score 530
Evalue 2.00E-148
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig1087 
TTTTTTTTTTTTAAGCACAAAAAGATTATTTGAAACTGCAAAATGATTCCATGTGCACATAGTACAACAGATATTATGGTCTGACTGGAGTATCAATACC
GAAATAGAGTACACGATAAAATCAAACTCGTACAGGCAAGTCTTTGTTCAACATGTTTGGAGAGTTTCATAACCGTAGGAAGAATTTGATCGATCTCTCG
ACCCTCACCAGGTGATGCAGTTCCACTGGGTGAAAGCTTGAAGGATTTCGATCCATCTCTAACCACCACCGGGTGATGCACTTCCACTGGGTGCACGGTG
GTGGCCATTGTCTTCGCCGTCCCTGGGGCTCAGGCTACGACCATTGGCAGCTGGGCTCATGTTTTTAGGGCTGTCAGCCTTCATTGGGCTCCTGCTGTTA
TCCCTTGGTGCAGGGCTCCTGCTGCCAGGAGGGGTGGGGCTCCGGGCCCTCCCCTTGGCAGGTGAAGCACTCCTCCTAGGGCTGCGACTGTCACGGGGGC
TCCTCATAGGGCTGCGACTGCCACGGGGGCTCTTCATAGGGCTGCGACTGTTGCGGGGGCTCCTCCTGGGGCTGAGACTGTCACGGGGGCTCCTCCTTGG
GCTGCGACTGTCGCGAGGGCTCCTTGATCGCCTTTCATCCCTCCTTGGGGAAACAGAGCGGCTGTAGCTCCTACTGCGGCTCCTGCTGTAGCTCCTATCA
CGCACCCTTCCGCGGCGAGGAGATGGAGATCTGGAGTAACTCTTTCCACGCTTGAGGTTCTTAGGGCTGTTCTGACAATCCCTTTCTATGTGGCCACTAT
CTCCACAACGATAGCACCTGTTTTTCCAGTCGCCAGCTTTGCAGTCCCGAGCCCAATGCCCATCAATCCCACAGTTAAAGCAACGCCCAGAACCAGGAGG
AGGTCCCCGACCCATATATTCACGGTCACCACCACGGCCACCACGGTCACGGTCACCTCCTCCTCCTTGGCCACGCGGAACCCCTTTAGCAAACTCAACA
ATCATGCGGCTTCCATCAAAGTCACGACCATCAAGATTGTACCTTGCTTCATCAGCATCCCTGGGATCACTAAACTCAACAAATGCAAACTCGTGCTTCA
TATCCACATGTCGCACTCTCCCATATCTGCCGAAGAGGTCTTCGAGGTCCCTTGTGCGGGTGCGCGAGGGAAGACGACCCACGTACAGCCTTGTGTTGCC
ACCGTAACGATCACGCTCATCGTAGCGAGGCATTCTGCGAGAGCGAAGCGGAGGAAACCCTAGCCGCGGGAGG
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