Home About update informationSite map Contact Us
Japanese | English  
Genome / Development
cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig23565  (registered. 2012)
Contig Information
Length 1123 bp
Clones alternative view 50 Clones [Download: TSV  ,  FASTA ]
Wh_EMI Dormant seed with water absorption after breaking 1
Wh_V4816 Shoot grown under cold condition for 16days 2
Wh_V483 Shoot grown under cold condition for 3days 1
Wh_VABA Shoot with ABA treatment 4
Wh_VHS Shoot with heat shock treatment 5
Wh_VSCB Liquid cultured tissue 2
Wh_VWD Shoot grown with dessication 2
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 1
WH_XR Roots, 18 day old plants were grown hydroponically 6
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 2
WH_XB Root 8
WH_XD Root, treated at 50 microM Al for 6h 10
WH_XE Seedling, infected with leaf rust 5
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|11124572|emb|CAC14917.1|| triosephosphat-isomerase [Triticum aestivum]
Score 486
Evalue 2.00E-135
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig23565 
TTTTTGAGCTAACGATAATAGCTGATATATGTTCAGTAGTAAACATTATCATTATTGGCTTGCAAGCTCAAGTCAGGGGGAGGAAACACAGTAGCAGCTG
CTCCACCGCAAAATTACTAGCATAGTACACATAATAAACACAGGAGAGAAAAAAGGGGTCTCTTCATCGTTGCTGTCTTCCTCCACGCCCAGAGGAGCCA
CACATCAAGATCTTGCTTAGGCAGACTTCACGGTGGCGGCGTTGATGATGTCGATGAACTCAGGCTTCAAAGAAGCTCCACCAACGAGGAAACCATCGAC
GTCGGGCTGCCCGGCCAACTCCTTGCAGCTTGCGCCAGTTACAGATCCTCCATAGATGATCCGTGTGGATGCAGCAACCTCAGGGCTCACATTGGTCTTG
AGCCAGTCCCTCAGATTGGCATGGACTTCCTGCGCCTGAGCCGGTGTCGCAACTTTACCGGTGCCAATGGCCCACACTGGTTCATACGCGACGACCACGT
TAGTCCAGTCCTTGATCTTGCCAGTAATTGCTTTTGTCTGTTCAGCGACAACTTCCATGGTTGATCCAGCTTCTCGCTGCTCAAGAGTCTCACCAACACA
TGCAATGACCTTCAAGCCCTGAGCGAGTGCATATGCAACCTTCTCTCCAACAAACTCACTTGATTCTCCCATCAAGCTCCTCCTTTCAGAGTGTCCAAGA
ATGACCCAGGGAACGCCGAGGTTGACAAGCATCTCAGCACTGACTTCACCGGTGAAAGCACCGCCCTTCTTCACCCAGCAGTTCTGAGCAGCAACTTGGA
TCTCTGGGCGCAGCTTAGCCTTGACGGTGGGAAGGAAGACATAGGGTGGGCTGACAACAACCTCGACAACATCCGTAGAGGCGATCTGTCCAGCGTTCAG
AGTATTGACGATACTCTCTACCTGTTCGACAGTTCCATTGCATTTCCAGTTGCCGCCGACGAAGAACTTGCGGCCCATGGCGACGGAGGAGGGGATCGGA
TCGGGTTGGGACGGGCGGACGGGAGAGGGGGGCTCGAGATTGGATTTGGTGGCGTTTCCAACAGTTCAGCATTTCTATCTCTGACAAACACAAACAGAAT
GTGTAAAACACTGAAGACATTAC
page-top