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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig1424  (registered. 2012)
Contig Information
Length 1206 bp
Clones alternative view 24 Clones [Download: TSV  ,  FASTA ]
Wh_f Spike at flowering date 1
Wh_EM Dormant seed with water absorption 2
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 1
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 1
WH_XN Leaves, plant was grown at constant 23Ž 4
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 2
WH_XR Roots, 18 day old plants were grown hydroponically 1
WH_CA 1
WH_XA Root 1
WH_XB Root 4
WH_XD Root, treated at 50 microM Al for 6h 2
WH_XF Seedling, infected with leaf rust 1
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 3
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|68037673|gb|AAY84884.1|| alternative splicing regulator [Triticum aestivum]
Score 568
Evalue 5.00E-160
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig1424 
ATTCGGCACGAGGGTAAACCCTATCTTCTCCTGTTCCCCTTCGTCCCCGGCCGGCGACGACGCCGCGCGCGCAGCGAACCCAGCCCCTCCTCCGGTTGCA
GTAAGCAAGGAAGGATGAGTAGGCGCTGGAGCCGGACCATTTACGTTGGGAACCTCCCAGGGGATATCAGGGAGCGGGAGGTGGAGGATCTGTTCTACAA
GTATGGACGGATAGTTGAAATTGACTTGAAGGTCCCCCCAAGGCCACCTGGCTTTGCTTTTGTTGAGTTTGAAGATCCCCGTGATGCTGAAGATGCGATT
CATGGTCGAGATGGTTACAACTTTGATGGGAATCGTCTGCGGGTTGAACTTGCACATGGCGGGAGGGCCAACTCTTCATCCCTTCCGAACAGCTATGGTG
GCGGAGGACGCCGTGGTGGTGTCTCTAGGCATACAGAGTATCGTGTTCTGGTTACTGGACTACCTTCTTCTGCATCATGGCAAGATCTAAAGGATCATAT
GAGAAAGGCTGGTGATGTTTGTTTCTCTGAGGTGTATCGTGAGGGTGGTGGTACTATTGGAATTGTTGATTATACAAACTATGATGACATGAAGTATGCT
ATAAGGAAGCTTGATGATACTGAATTTAAAAATGCATTCTCTCGAGCGCCTATAAGGGTGAAGGAGTATGCTGGCAAAAGCAGCCGCTCCTATTCACGCA
GCCGTAGCAGAAGCCGAAGTGGCAGCTACAGCAGGAGTCCGAGTCCAAAGAAAAAACCATCACGCCGTTCAGCGTCAAGATCTCGGTCGAGATCAGTTTC
TTCCCATTCAAGGTCACCGTCAAAGGGACGCTCTCCATCAAGATCACCAGCAAAATCCCAATCCCCTGTCGCTGCGTCCCCCGTCGTCAATGGTGAAGCA
GCAAGCCCCAAGAGGGACCCAAGCAAGAGCCCATCACGTTCCCGGTCTCCTGATGCCAAATCAGAGTAAAACGGATGCGAGGCTAGGAGCGGTGAGAGGC
GGAGCCATGGTCTTCAAATTCTTCAAATTTTGTCTTCGCCAACTTCTGCATCCGCTGTTATAGTACTATCTCTGTGTTCGGTTATTCTAGGTTCCTTGAT
GTTTCTGTAAAAACTTGTTTGGATGGATTCTTGAGATTTATGTACTCTCTTCATTGTCAGCATTTTTACTTGGATTATTATCTATGGTCGTTGGCTCGGA
AGATAT
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