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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig7270  (registered. 2012)
Contig Information
Length 1528 bp
Clones alternative view 27 Clones [Download: TSV  ,  FASTA ]
Wh_dL Crown of seedling 2
Wh_r Root 1
Wh_DPA20 Seed DPA20 3
Wh_EM Dormant seed with water absorption 2
Wh_RDr Root of dessiccated seed 2
Wh_VWD Shoot grown with dessication 2
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 1
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 2
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23℃ ) 1
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 1
WH_XT Roots, 18 day old plants were grown hydroponically 2
WH_XB Root 3
WH_XC Root, treated at 50 microM Al for 6h 2
WH_XE Seedling, infected with leaf rust 1
WH_XF Seedling, infected with leaf rust 1
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|115459296|ref|NP_001053248.1|| Os04g0504800 [Oryza sativa (japonica cultivar-group)]
Score 682
Evalue 0
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig7270 
CTTCAGCCATTGGTCAGTACCCCCGCAGATGATGGTATCCCATACAAAGCAACTGAAGCAAGTAATGTCGGACAGCAATGTCACTCTTCACTCATATTTA
ATAGCAAAACTTTCGGCAAGTCATAACCGCATAAGAGGTATGTAACCAAGCCCTCAATAGTAGCCAAACACGGGAAAAGGTGCCTGCCAATCATTGGCAA
AGAGACCAGGCAGATAGAGCCTAACAACCAGTGCAAAAACGCAACTCACCAAAGTTCAACCATGGAGGACAAAACAATCTATAGCATCATGAGACTGCTT
GCAAACTGACTCTAATCTAAGAGATAATGCCGTCGCTCAAGGTTAGACCGGCGAGCTGGCTGGTAGGGGCGTTGGGGTTCTGCTGCTGGGCCACGTTGCG
GAGAACATCCATCGCCTCAGCAACCTTGGACTTGAGAGCCTCTGGAGACTCAAGCAGATGCAGCACCTCCGTCTGGTCCATCTCCAGAAGCATGCCGGTC
ACCTTGGCAGCTTGTTGGTGTTCAAGCTTCTCAACAAGTGGATAGAGGCTTTCGCCAAGTATCGTTCTTTGTTGCTCTGGAGTAGCATTTGCAAGGGCAG
ATGTGAGTGTTCCAATTGGAGGAGCAGGTGACACGCCAGCATCTCGCACAGGGAAGCTTCCCATATCATATGGCTGAACCATACCTCCAACACCAACCCC
AGGCATCTGTTGAACCTCAGGCATGTGACGAGGTCCAGGTGGGTACCGGTAGACACGTCCCCTTGGAACCATCTGTTGCTGAAATGGCTGAGGAGTTTGC
TGTCCCTGAGCAGACCCAGGACCATTGCGCCTGATACCTGGGCGCAGACCCTGCTGACCTGGTTGGACAACTGGCACAAAGTAATTTGGCATATGGGCAC
CACCCCCAGGCCTCATTCCTGGAACAAGCTGTTGCTGGAAACCGTACCCAGGCTGAGGGGGTATCATAGCAGGTGGAGCTTGCCCATAGAAGAGTTGCTG
CCCAAGAGTAGGCATAGGAGGGTACATTGGGAGTCGAGGAGTCATAGAAGGGGTCATTGGTACAGGGCGCATCTGAGAGAATTGAGCCTGTAACATTGCT
TTTCTATCTTCTTTACGCTGTGCAAATGCAACATATAATGGCTTTCCAGATATCATTTTGCCATTCATTTCAGTGAGAGCCTGAGATGCTTCCTCGCGGG
TAGAAAATGAAACAAAGCCAGAGCCCTTGCTAACACCATTTTGATCACGCATTATCTTGCAAGAGGTAATTTTGCCAAAGTTAGAGAACAGCTCACGTAG
CTGATCATCTGTAATGCCATCATCCAAATTCTTCAAGTACAAGTTCTGTCCTTGATATTTATCAGCTGCATCTTTCATGCTTTGCTCAAACCTTCTCTTC
AAGTCCATCTCCCTTTCAGACTTCTTCTGAGCTCTACCAACATACCACTCTTTGTCATTGATTTTCTTTCCATTAAGTTCCTCAACAGCATGAGCAGCAT
CATCTGGGCTCTCAAAATTGCCTCGTGC
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