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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig2020  (registered. 2012)
Contig Information
Length 552 bp
Clones alternative view 16 Clones [Download: TSV  ,  FASTA ]
Wh_dL Crown of seedling 2
Wh_h Spike at heading date 2
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 1
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23℃ ) 2
WH_XD Root, treated at 50 microM Al for 6h 4
WH_XF Seedling, infected with leaf rust 2
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 2
WH_XW Leaves, seedling were infercted with blast strain Pr48 for 4 days (23℃ ) 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|115444593|ref|NP_001046076.1|| Os02g0178400 [Oryza sativa (japonica cultivar-group)]
Score 139
Evalue 2.00E-31
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig2020 
TTTTTTTTTTGAAACGGAGGGAGTACTTTATAATTTTTTTTTTCAAGATCTATACTCATTACGAAGATTAAGCTGATGACAATTTCTCACAAAACAGGCC
TTTAACAACAAGTCCAGAACAAACTTTGGGCGCCTACTTCGACACACCGCAGGCTCAACTGCCGGCATCGCACTATCCCCGCATCATGTCGTCCTCCAAC
CTAGCCGGAGCCGACGATGATGTTGTTGATGGGGATGAAGATGAGCTTGACGAAGAACCCCACGAACCCCATGACGACGAACCCGATCGCCGTCCGCGCC
GCCACCTTGGTGAACTCCTTGCGGTCGGGCTTGTGGCAGCGCTTGACGAGGCGGACGCTGTCCTTGGCGAACTCGCGGAGGGGGTCCACCACGGAGTCGA
CGGCGTCCATGGCTGCTGCCGGCGGGCGAGGCGAGATCTCCGAGCCGGCGACGACGACGAGGTCGCGCGCGTGAGGGGAAGGTGGAAGCCGACGGGGGAA
TGCTGCTTTGGATTTGTGCGGGTGGGTTTCGCGGATGGCTTCTTCCTCGTGC
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