Japanese | English  
Genome / Development
cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Wh_VWD_all.Contig87
Contig Information
Length 731 bp
Tissue Shoot grown with dessication
Clones 2 Clones [Download: CSV  ,  FASTA ]
whvd11h19    rwhvd11h19   
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os03g0123100 [Oryza sativa (japonica cultivar-group)] >gi|25446690|gb|AAN74837.1| Putative ubiquitin-conjugating enzyme [Oryza sativa (japonica cultivar-group)] >gi|108705922|gb|ABF93717.1| Ubiquitin-conjugating enzyme E2 I, putative, expressed [Oryza sativa (japonica cultivar-group)] >gi|113547273|dbj|BAF10716.1| Os03g0123100 [Oryza sativa (japonica cultivar-group)] >gi|125542190|gb|EAY88329.1| hypothetical protein OsI_09788 [Oryza sativa Indica Group] >gi|125584745|gb|EAZ25409.1| hypothetical protein OsJ_008892 [Oryza sativa (japonica cultivar-group)] >gi|215692765|dbj|BAG88233.1| unnamed protein product [Oryza sativa Japonica Group] >gi|215734816|dbj|BAG95538.1| unnamed protein product [Oryza sativa Japonica Group]
Score 843
Evalue 1.48461e-88
Total Hit Count 500
Registered year 2003
Contig Sequence     [ Download ]
>Wh_VWD_all.Contig87
ACTCAGCGACAGAGAGCAGCCAGTAGCCTCCTCCGCCGCCACCCATGTCAGGAGGAGGGATCGCGCGGGGCCGCCTCGCGGAGGAGCGCAAGGCCTGGCG
CAAGAACCACCCCCATGGATTCGTCGCGAAGCCGGAGACGGTGGCCGACGGGTCGGTGAATCTCATGATCTGGAACTGCACCATCCCCGGAAAGCAGGGG
ACTGATTGGGAAAGTGGATACTACCCACTTACTCTCCACTTCAGTGAGGACTACCCTAGCAAACCTCCCAAGTGCAAGTTCCCGCAGGGTTTTTTCCACC
CAAATGTCTATCCTTCAGGGACGGTCTGCCTCTCGATTCTTAATGAGGATAGTGGTTGGAGACCTGCCATCACTGTTAAGCAGATTCTAGTTGGAATACA
GGATTTGCTTGATCAACCTAATCCAGCTGATCCTGCCCAGACTGATGGTTATCACCTCTTTATCCAGGATCCAGCAGAGTACAAGAGACGCATTCGGCTG
CAGGCCAAGCAGTACCCTGCTCTGGTTTGAGGATCCAACGTAGCAGTCTAAAATCATAAATTACCGCACCTGAAAATATGAAGTATGACTAAATATAACC
GAAAGCGGGGTATTGTGGAGAGCTTTCCATTGTGACCGTGGACATTTGTGACGTGTGGTCTGGTGTTGACCAAACAAAAATCAGGTCCTTCTGCTTGAAT
GATGGATGTGTGGATACTTTTAAAAAAAAAA
page-top