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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

MUGEST2003_all.Contig16927  (registered. 2007)
Contig Information
Length 1033 bp
Clones 5 Clones [Download: TSV  ,  FASTA ]
Wh_EM Dormant seed with water absorption 1
Wh_EMC Dormant seed with cold treatment after water absorption 2
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os06g0609600 [Oryza sativa (japonica cultivar-group)] >gi|51090372|dbj|BAD35633.1| calcium-binding EF hand-like protein [Oryza sativa Japonica Group] >gi|51091947|dbj|BAD35476.1| calcium-binding EF hand-like protein [Oryza sativa Japonica Group] >gi|113596086|dbj|BAF19960.1| Os06g0609600 [Oryza sativa (japonica cultivar-group)] >gi|125556028|gb|EAZ01634.1| hypothetical protein OsI_23671 [Oryza sativa Indica Group] >gi|125597826|gb|EAZ37606.1| hypothetical protein OsJ_021089 [Oryza sativa (japonica cultivar-group)] >gi|215704179|dbj|BAG93019.1| unnamed protein product [Oryza sativa Japonica Group]
Score 993
Evalue 1.08808e-105
Total Hit Count 500
Registered year 2007
Contig Sequence     [ Download ]
>MUGEST2003_all.Contig16927 
CCAAGGGCGAAGTGGGAAAAATATCGCACCTCCCTCGCCGCCGATCAGCGCCTCCGGTTCCGGATCCCCGCGCGTATCCGCATCGCCGGCTTCCTCGCGC
AGGCAAGGTGCTGCTACTGTTCGCTCATTTGCTCTGTATCCAGTTGTGGGCACTGAGGGAACTGAAGTGCTGGCATGGGAGGCGTGTTTGGACGCCCCGA
CGCCGGCAGGCAGGGCTCGCATGGCATGAAGCTAGAGTCGAAGATGGTGGAGTCCATGAAGCAGAGAGCGGCGCATGGAACTTCGGTCAAGTCGTTCAAT
ACTATTATCATGAAGTTCCCCAAAATCGACGAGGGCTTGAGAAAATGCAAGACTATCTTTGAGCAATTCGATGAAGATTCCAATGGTGAAATTGATAAAG
AAGAGCTGAAGCATTGTTTTCAGAAGCTGGAAATCTCATTCACAGAGGAGGAGATAGGCGATCTCTTTGAAGCTTGCGACATAAATGAAGATATGGGCAT
GAAGTACAATGAGTTCATTGTCTTTCTGTGCCTTGTTTATCTTCTCAATGATCCGACTGCGTCAGAAGCAAAGACAAAGATGGGATTAGGAGATCTTGAG
TCAACTTTTGAGACCTTGGTTGATGCATTTGTCTTCTTGGATAAGAATAAGGACGGGTATGTGAGCAAGGATGAGATGATTCAAGCAATAAATGAGAGCA
TACCAGGGGAACGCTCCGCTGGCCGTATAGCCATGAAAAGATTTGAGGAGATGGATTGGGACAAGAATGGGATGGTTACCTTCAAGGAATTCCTGTTTGC
ATTCACTCGCTGGGTAGGGATTGGCGAAAATGAGGACGACGATGAATGAACGATGTGGAAGCGACAGCTGAAGAATGGCTGACTATAAATTGGTTGCATG
GTGGTTTTATCTTCCTGTTAATAGTGACTCGGCATGTTCCAAATAGAATGACTGACATGTCTGAACACCTGTATCAAANCAGTGTCTGTGACTGCTTCGC
CTCCACTGCGCAAGTTATGTTGTGTAAGCAAAA
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