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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig3642  (registered. 2012)
Contig Information
Length 1059 bp
Clones alternative view 21 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 1
Wh_oh Pistil at heading date 2
Wh_V4816 Shoot grown under cold condition for 16days 3
Wh_VSCB Liquid cultured tissue 1
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 2
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 2
WH_XB Root 4
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 4
WH_XW Leaves, seedling were infercted with blast strain Pr48 for 4 days (23℃ ) 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|90959771|dbj|BAE92726.1|| multidomain cystatin [Triticum aestivum]
Score 473
Evalue 2.00E-131
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig3642 
CTGCAGGAATTCGGCACGAGGCGCACACGCAGTNNNCACGAAGCAAAGCGAAACCGCAAAGGACTCCTCCGGCAGAGCATGCGCGTTGCTGCGACGCGGC
CCGCCTCCTCCGCTCCCGTTGCCCTCCTCGCCGCTCTAGCCCTCCTCTTCCTCGTCGGCTCCGCCTCCCTCGCCATCGGAGCCATGGCCAGCCACGTCCT
CGGCGGCAAGAGCGAGAACCCCGCCGCGGCCAACAGCCTCGAGACCGACGGCCTCGCCCGCTTCGCCGTCGACGAGCACAACAAGCGCGAGAACGCGCTG
CTGGAGTTCGTGCGGGTCGTGGAGGCCAAGGAGCAGACGGTGGCCGGCACGCTGCACCACCTCACGCTTGAGGCGCTTGAGGCCGGGCGGAAGAAGGTGT
ACGAGGCCAAGGTCTGGGTCAAGCCGTGGCTCGACTTCAAGGAGCTGCAGGAGTTCCGCCACACCGGGGACGCCACCTCCTTCACCATCTCCGACCTCGG
CGCCAAGAGAGGTGGACATGAGCCTGGATGGCGTGATGTGCCTGTGCATGATCCTGTAGTCAAAGATGCTGCAAGCCATGCTGTGAAATCAATCCAGCAG
AGGTCGAATTCCCTTCTCCCATATGAACTTGTTGAAATCGTTCGCGCCAAGGCTGAGGTGGTTGAAGACTTCGCCAAGTTTGATATCCTCATGAAACTGA
AGAGAGGGACCAAGGAGGAGAAAATGAAAGCTGAGGTGCATAAAAACCTCGAGGGAGCTTTTGTGCTGAACCAGATGCAGCCAGAGCATGACGAATCTAG
CAGCCAGTGAATCTGACTTGTTAAGCTCACAGTAATGTAGTTTTGTATTAAGAAATAAACAGTAAACCTGTCACTACCTGGATATTATGCTTTCTGCACT
GGCTTGGTTGTTGGATGCAGCAAGATGGAGCTGTGTTCCTTACTAGCTGAATCTTGTTTGGTTGCTGTTAATGGTGGAATGTGCAACAAATCTTGTAACT
CGAGGGTAATGTTGGATGCGATATACACTGTCAATTTCGGTTACTCCGCAAAAAAAAAA
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