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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig16171  (registered. 2007)
Contig Information
Length 1682 bp
Clones 64 Clones [Download: TSV  ,  FASTA ]
Wh Spike at meiosis 2
Wh_SL Seed DPA30 12
Wh_dL Crown of seedling 9
Wh_e Seed DPA10 7
Wh_f Spike at flowering date 7
Wh_h Spike at heading date 6
Wh_oh Pistil at heading date 2
Wh_r Root 2
Wh_yd Spikelet at late flowering 12
Wh_yf Spikelet at early flowering 5
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit RecName: Full=Elongation factor 1-alpha; Short=EF-1-alpha >gi|170776|gb|AAA34306.1| translation elongation factor 1 alpha-subunit >gi|949878|emb|CAA90651.1| elongation factor 1-alpha [Hordeum vulgare subsp. vulgare]
Score 2262
Evalue 0
Total Hit Count 500
Registered year 2007
Contig Sequence     [ Download ]
>Contig16171 
tcggcacgagggccgccgccgccgccgcctcctcctCTCGGTTCCCTCTCCTTCCTTCGAG*AGCTTCAGCCATGGGTAAGGAG*AAG*ACTCACATCAA
CATCGTGGTCATTGGCCACGTCGACTCTGGCAAGTCGACGACCACTGGCCACCTGATCTATAAGCTTGGAGGCATTGACAAGCGTGTGATCGAGAGGTTC
GAGAAGGAAGCCGCTGAAATGAACAAGAGGTCTTTCAAGTACGCCTGGGTGCTTGACAAGCTCAAGGCCGAGCGTGAGAGGGGTATCACCATCGATATTG
CCCTCTGGAAGTTCGAGACCACCAAGTACTACTGCACCGTCATTGATGCCCCTGGTCACCGTGACTTCATCAAGAACATGATCACCGGTACCTCCCAGGC
TGACTGTGCTGTTCTCATCATCGACTCCACCACTGGTGGTTTTGAGGCTGGTATCTCCAAGGATGGCCAGACACGTGAGCACGCTCTCCTTGCTTTCACT
CTTGGAGTGAAGCAGATGATCTGCTGCTGCAACAAGATGGACGCCACCACTCCCAAGTACTCAAAGGCGCGTTACGAAGAAATTGTGAAGGAGGTCTCTT
CCTACCTGAAGAAGGTCGGCTACAACCCTGAAAAGGTTCCCTTCGTCCCCATCTCTGGGTTCGAGGGTGACAACATGATTGAGAGGTCCACCAACCTTGA
CTGGTACAAGGGCCCAACCCTGCTTGAGGCGCTTGACCAGATCAATGAGCCCAAGAGGCCCTCAGACAAGCCCCTCCGTCTTCCCCTCCAGGACGTTTAC
AAGATTGGTGGCATTGGAACTGTGCCTGTTGGCCGTGTTGAGACTGGTGTCATCAAGCCTGGTATGGTTGTTACCTTTGGTCCCACTGGTCTGACAACTG
AGGTCAAGTCTGTTGAGATGCACCACGAGTCTCTCCTGGAGGCGCTTCCTGGTGACAACGTCGGCTTCAACGTCAA*GAACGTTGCCGTGAAGGATCTGA
AGCGTGGTTTTGTTGCATCCAACTCCAA*GGATGACCCTGCCAAGGAGGCAGCCAACTTCACC*TCCCAGGTCATCATCATGAACCACCCTGGTCAGATT
GGCAACGGCTACGCCCCAGTGCTGGACTGCCACACCTCGCACATTGCTGTCAAGTTTGCTGAGCTGGTGACCAAGATTGACAGGCGATCTGGTAAGGAGA
TAGAGGCCGCGCCCAAGTTCCTCAAGAATGGTGATGCTGGCATAGTGAAGATGATTCCCACCAAGCCCATGGTTGTGGAGACCTTTGCCACTTACCCGCC
TCTTGGTCGTTTTGCTGTCCGTGACATGAGGCAGACTGTGGCTGTTGGTGTCATCAAGGGCGTCGAGAAGAAGGACCCAACCGGGGCCAAGGTGACCAAG
GCTGCCATCAAGAAGAAGTAATTCGACATTGATATCCAAATCACTGTTCAGACACCAAGCAGTTTTTAGTATTGGCTGAGTTTTGTTAAGGGCATTGTTC
GTACTGGTATATTTTAGCTGTTCAGCTGTTAGCGCTGCATATCGTGCCCTTGGTGGTCGT*CTGTC*TTGTGCCTTTTACATACTGTGTCCTAATGTAAG
CTTCGGTGAAACCTGGATGTTATGAGACCTGGTTGTGTCTTTTAATACTAGCTTGTTGCATTTTATCTGTGTAaaaaaaaaa
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