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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig10295  (registered. 2012)
Contig Information
Length 1462 bp
Clones alternative view 273 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 6
Wh_dL Crown of seedling 23
Wh_e Seed DPA10 9
Wh_f Spike at flowering date 5
Wh_h Spike at heading date 4
Wh_oh Pistil at heading date 2
Wh_r Root 8
Wh_yd Spikelet at late flowering 10
Wh_CSEC Callus 5
Wh_DPA20 Seed DPA20 8
Wh_EM Dormant seed with water absorption 10
Wh_EMI Dormant seed with water absorption after breaking 9
Wh_KMV Shoot grown with continuous light after cold treatment 4
Wh_MS Seed DPA5 of DT3DL CS wheat 10
Wh_OKCS Seed DPA5 5
Wh_PCDAM Anther at meiosis 1
Wh_RDr Root of dessiccated seed 4
Wh_SHC Shoot grown with cold treatment 13
Wh_SHDr Shoot grown with dessication 3
Wh_V4816 Shoot grown under cold condition for 16days 3
Wh_V483 Shoot grown under cold condition for 3days 4
Wh_VSCB Liquid cultured tissue 9
Wh_VWD Shoot grown with dessication 3
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 3
WH_XJ Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 4
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 4
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 2
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 9
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 6
WH_XR Roots, 18 day old plants were grown hydroponically 2
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 3
WH_XT Roots, 18 day old plants were grown hydroponically 4
WH_CA 1
WH_SP 15
WH_XA Root 6
WH_XB Root 19
WH_XC Root, treated at 50 microM Al for 6h 25
WH_XD Root, treated at 50 microM Al for 6h 7
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 1
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 4
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|119638443|gb|ABL85034.1|| ribosomal subunit 8E protein [Brachypodium sylvaticum]
Score 410
Evalue 3.00E-112
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig10295 
TTTTTTTTTTGAGATTCGAGTTTTTTTTTTCACTTAACAGATGAAAATACTGCAAGGTAGAACAACACATAATAGAATCTGGATAGCTTTAGATCACAAC
CAAAACAGGCAAAACATTCTCAGTTCAACCTAGGACTCGAACAGTTTACAGAAAATGGTGTTCAGTATGTCTGCAAACATGACATGGACGCAACATCTAA
GAAAATCCAACGAGTAACATGCAGCAGCTCTTCGGCCTAAGCTGTGGCACCCTTGCCCTTCTTCTTCTGGAGCTTCCTCATGTAGAACTCCAGCTCCTTG
CCCTCCAGGATGTACCCATCAGCTCTGCCACACTGTCCAGGGCGAGACGAAATGCAGGCCAGCAGCCTTCCACCACTGAACTGCTCCTCAATGTGCGAGT
CCAGTGTACGTCCCTGCTGGCGCTTCTCAAGCTTCCTCTGGACATTGTTGCTCTTCTTTGCTTCCTCTGTGGCAGCAGCAGCAACCTCAGCCTCTTGTCC
CTCAGCAGCTTCCTTCTTGGCAGCTGCAGCAGCTTTCTTCTTCCTACCGATTTCAACTCCATAATGAGTCAGGTACCACTGTTTGAAAGGGGCTGCATCA
ACTTGCACAATGGCATTCTTGACAAGGGTCTGAGTCCTCACAAGCTCATTGTTCGACGAATTGTAAACCACATCCAGGAGACGGGTCTTGCGGGTCACAG
CCTCACTACCCCATGAGAAGTTACCAGTGTCAAGACGGAGAGCCCTCCACTTCACGTTACCTCCGCGAACACGGACCCTCCTCACTGTCTTGTTGCTCGA
AAGCTTAGTGTTGGCTGGCTGGCGGCCGAGCTCATACTTTCGCTTCTTCCTCCAAGCCTTCTGCTTCCCACCGGTGGCCCGGCGCTTGTGCATGGAGTCA
CGCGAGATACCCATGGTGGCGTCGGTTGCTTGGCTCCGCTGCTGATTCGCCTGCGCGCCGCCGCAGCTTTGGTTTGGCTCCTTGAAATCTTTTTGGGTCC
ACAGATTTGGAGGATGTCTTGCAACTGCGGATCAGGCTGCAGCTGCGGCTCAGACTGCAAGTGCGGGAAGATGTACCCTGATCTGACGGAGCAGGGCAGC
GCCGCCGCCGAGGTCGCCGCCGTGGTCGTCCTCGGCGTGGCGCCTGAGAACAAGGCGGGACAGTTCGAGGTGGCCGCCGGGCAGTCCGGCGAGGGCTGCA
GCTGCGGCGACAACTGCAAGTGCAACCCCTGCAACTGTTAAGCTGCATGCACTCGTACGTAGTACGTGTGATGGTGTGAGAGTATACGTGAATAACGAGC
GTCTGANCTGATGGAGTCGAGCAAGTGTGCGTGTGTGTGTGGTTTACTTGCTCGCTCTCCGTCTATGCTCTGCCCTTGCTGTCCCTGTGTGTATGTGTAT
GCATGTGTCCCTGTAATTGCTTCATCTATCTCCACTATGGATGGAGTGGTGAATATGTAAGA
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