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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig6300  (registered. 2012)
Contig Information
Length 1433 bp
Clones alternative view 1837 Clones [Download: TSV  ,  FASTA ]
Wh_dL Crown of seedling 2
Wh_e Seed DPA10 5
Wh_f Spike at flowering date 21
Wh_h Spike at heading date 30
Wh_SH - 54
Wh_CSEC Callus 2
Wh_DPA20 Seed DPA20 4
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 6
Wh_KMP Shoot grown under continuous light 55
Wh_KMV Shoot grown with continuous light after cold treatment 53
Wh_MS Seed DPA5 of DT3DL CS wheat 6
Wh_OKCS Seed DPA5 11
Wh_PCDAM Anther at meiosis 16
Wh_SHDr Shoot grown with dessication 11
Wh_V4816 Shoot grown under cold condition for 16days 97
Wh_V483 Shoot grown under cold condition for 3days 116
Wh_VABA Shoot with ABA treatment 49
Wh_VHS Shoot with heat shock treatment 109
Wh_VWD Shoot grown with dessication 74
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 66
WH_XJ Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 1
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 48
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 20
WH_XN Leaves, plant was grown at constant 23Ž 47
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 23
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 63
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 85
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 2
WH_XT Roots, 18 day old plants were grown hydroponically 2
WH_SP 11
WH_XE Seedling, infected with leaf rust 153
WH_XF Seedling, infected with leaf rust 207
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 206
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 120
WH_XV Leaves, plant was grown at constant 23Ž 10
WH_XW Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 6
WH_XX Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 25
WH_XY Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 21
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|4090293|emb|CAA10497.1|| hypothetical protein [Secale cereale]
Score 362
Evalue 8.00E-98
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig6300 
GCAAACAATAATAATACGACGAACACGATAATCCAANNNTTATTTAGGCACCTCAAGTCACAACGATTTCTCGTTACCAAATCCATCAATCCACAACAGC
CCACCGACCGACACAGACGCTATTAGAACAGAATAGAACACAAAGTATAGGCGAGGGAGGAGGAAAAAAGGCTTAGATCTTGTCGATGTCCTCGTCCTCG
AACTGGATGTAGTCGCTGTCGCCCTCGCCCTCCTCGGGGCCGTCGACGTCAACGCCCTCGTTGAGGCGGAGCGTGTCGGGGAGCTCCCCGTAGGCCTTGA
GTAGGCGGGCCTCGTCGTTCATGTACTTGAGGATGACGTCGGCCTTGTCGTCCTGGTAGTCGCGGAGGCCGACGAGGACGATGTCCCCGGCGGCGATCCA
GACCTTCTTGTGCATCTTGCCCCGGATGTGGCAGAGGCGCTTGGTGCCGTCGACGCAGATGGCCTCGCAGCGCCCGTTGCCGAGCATCCGCGTCACCTGC
GCGTACTCCTGGCCGTCCTCCTTGAACACCAGCTCGCGCTTGTCGTCGTCGGCCTCGTTCTCCTCCTCCTAGCAAGCTATATACCTACATAGTACAGCCA
TGGCCCCCACCGTGATGGCCTCGTCGGCCACCTCCGTCGCTCCTTTCCAGGGGCTCAAGTCCACCGCCGGCCTCCCCGTCAGCCGCCGCTCCAACGGCGC
TAGCCTCGGCAGCGTCAGCAACGGTGGAAGGATCAGGTGCATGCAGGTGTGGCCCATCGAGGGCATCAAGAAGTTCGAGACCCTGTCTTACCTGCCACCG
CTCAGCACGGAGGCCCTCCTCAAGCAGGTGGACTACCTGATCCGCTCCAAGTGGGTGCCTTGCCTTGAGTTCAGCAAGGTCGGGTTCATCTTCCGTGAGC
ACAATGCGTCTCCCGGGTACTACGACGGCCGCTACTGGACAATGTGGAAGCTGCCTATGTTCGGGTGCACCGACGCCACACAGGTGATCAACGAGGTGGA
GGAGGTCAAGAAGGAGTACCCTGACGCGTACGTCCGCATCATCGGATTCGACAACATGCGCCAGGTGCAGTGCGTCAGCTTCATTGCCTTCAAGCCACCG
GGCTGCGAGGAGTCCGGCAAGGCCTAAACAGCTCACTCACCACGGGCCACATATAAAGTGCCATTGCAGTTTTGTCAACTCTGACATTGCTTTGGGTTTT
CCTTCTCCATTTGTCTTTCTTACTTGTTCCTAAGAATATGTGTATGTCCATGTTCATGTAACAACATGGCTCGAGAAAGCGTGCTCGTATGTGAATGCAA
TCGGTGGCTATGTATATGCACATGCACATAATATATTATACAATCTGTCGACTATGTATTCGGGTAATTAATAATGAGAAACATCTTTGCCACCGCAAAA
AAAAAATTTATTTCCGTCGCCAGACATAGTTTA
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