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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig11850  (registered. 2012)
Contig Information
Length 1365 bp
Clones alternative view 54 Clones [Download: TSV  ,  FASTA ]
Wh_SH - 2
Wh_DPA20 Seed DPA20 1
Wh_V483 Shoot grown under cold condition for 3days 2
Wh_VABA Shoot with ABA treatment 4
Wh_VHS Shoot with heat shock treatment 2
Wh_VWD Shoot grown with dessication 1
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 1
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 4
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 3
WH_XN Leaves, plant was grown at constant 23Ž 4
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 3
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 2
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 6
WH_XE Seedling, infected with leaf rust 2
WH_XF Seedling, infected with leaf rust 2
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 10
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 1
WH_XV Leaves, plant was grown at constant 23Ž 2
WH_XX Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 1
WH_F/WH_R 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|115443619|ref|NP_001045589.1|| Os02g0101500 [Oryza sativa (japonica cultivar-group)]
Score 731
Evalue 0
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig11850 
GCAGGGCAGGGAAACATATAATAATTTCATAATTGATCAAAAATCTCTTGCTTGATATATATACTCATTCATTCATTCATTCAGTACTACTACTCCATGA
GGATGAGAGCATCCATACATATATACTGGGAAGGAGCTATATATGCATAGCATCTTAGCAAGTAGTAGTAGTAGTAGCAGTGATTCATCCATCTCTGCCT
CTGCCTAAAGCTTGGAAGATGGCAGGCCGAGCTGCTTGGCATTAACGATGCTTGGGCAGGCAGGGGGCGGCGCCGCCTTCTCGTCGAGGAAGGGCTCCAC
CGCGTTCGGGTTCCCCCACACCGGGTACCCCTTTATCTTACCAAGCACGTTAAGAGCAGCGAGTGTCGCCATCCCTTCACGCGTCCACTTGGATGCAGAT
GCGATGTGAGGCACGACAACGGCATTCTTCATCTCAGCCAGCCCTGGCTTCATGTAAGGCTCATCCTCAAAAACATCGAGGCCAACACGGAACATGGGAT
TCGCCCTCAGGTGCTCCACCAGTGCTACCTCGTCGATCACCGGGCCACGGCTCGCGTTCACCAGCACTGCCTCCTTCTTCATCATCGCCAGCCGCTCTGG
GTTTATCAGGTGGTACGTTGTCTTGTCCAGCACTGGGTGCAGGCTTATCACATCAGCCTCCCTGAGGACCTCCTCCATGCTGGAAGCCCTCTTCCATGTC
ACGGGCTGCTCACCATTGGCTTTCAGGAACTGGCCATACGCGGTGACGAATTTCTCGAGCCGTGTGGACTGGTACAGGTCGAAGTAGATCAAGTTCATCT
TGAACCCCTCAATCATCATCCTTGCATAAGCTGAGNCGATGCGGCCAGCTCCGATCACTCCAACAGTCTGCCCCTTGAGCAAGTTCCCAACAAACAAGTG
CGGGAGCCATCCATCGTAGAGGCCAGCCCTCATGAATTGGTCGGCCTCAACGATNNTCCGGGCAGCCGCCACCGACAGCGACGCCGCCAGCTCCGCCGTT
GTCTCAGTAAGAACACCAGGCGTGTTGCCGATGGCGATGCCATTCCTGTTGGCAGCATCGACATCAACGTTGTTGTAACCGACGGCCATGTTGCTGAAGG
CTGTCCCGCCGGCGCGCTTGAGCGCAGAGAAGAGCACTTCCCCCCAGTCCTCTGTTAGCTGGCCGATGACACCATGGCAGTGATCACCAATGAGTGCCAG
TATGTCGTCGACAGAGAGGATGGTCTTCTTCTCTGTGCATATCTCGAGGCGGCAGTCGTTGTCAGTGAGGAGCTTGATCCAGCGGGTGCCGGGCATGGAC
TTGGTGCTCACCACGCGGTACTTGCCGCTGGGGTTCCACACCTCTATCGATATCGGCTTCGCCAT
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