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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig12247  (registered. 2012)
Contig Information
Length 1265 bp
Clones alternative view 6 Clones [Download: TSV  ,  FASTA ]
WH_XJ Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 1
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23℃ ) 1
WH_XE Seedling, infected with leaf rust 1
WH_XF Seedling, infected with leaf rust 1
WH_XW Leaves, seedling were infercted with blast strain Pr48 for 4 days (23℃ ) 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|115459530|ref|NP_001053365.1|| Os04g0527000 [Oryza sativa (japonica cultivar-group)]
Score 254
Evalue 1.00E-65
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig12247 
TCGATATCCCGAACCAAACAAGTCAACGGAACCGACATTCTTGGTGTGTCATTCCATTCCAGTTCGTTTTAAACCAAACACATCGGTTGCAGGCCTCCAG
CACCTACCAATCCATGACGACGCCCATTGATAAGCCATTAGAGGGCCCCCGCTGCAAGGCTCGTTGCCCTGCTCGGGGCCTCTTCACGGCCATGCCCATG
CTCGCGCGGCTCGTCGTCCACCTCCAGCCTCACGTATAGGGACGTCCCGTAAGCCACCAGGTCGATAACCTAGGCCTCGTGCCGCGTCGGCTCGGGCGAG
CGCCAGTCCTCACACCTTGCTGAGCTCCCGGCGGCGATGTTACGCTGCGCCTAGTCGCCGAGTCCGACGAGATCTCCTAAATCACGCATGCTGCTCGTGT
TGTAAGTCAGAGAGTGATCGGCATCGCCGTGCGCTCGCGTAGCTTTCACGCCGCGGTAGGCCGCAGGCGCCGCCCGCTCCCGGTGCCCGCCCCCTGCGAC
GACGGCACCTTCATCCCATTCCCACCCCCCGCCATGCCGATGACCTGCTCGAGGTGCTGCAGGGACACCTGGTAGCTGACGAAGCCCATGAACCAGAACT
CGAAGTCGTCGTCGGTCACCAGCTGGACGTACTTCTGCTCCGGCCGGTGCTGGTTCTCGCTCGGCCTGGCCGCCTTCACCCTCCTCAGCGGGACGGCCAC
CTTGTACGGCACCCGTACCGTCTCGCCCTTGGGCGAGGTCAGCGCCAGCGACCGGTCGCTACGGAAGGCCACCTTCTCCGTGGATACGAAGAGCATCCCG
GCGATCGGGCCGGCGGTGGTGGACAGGTAGCACTGCGAGGCCTTGAGGAGCTTCTCGCCCTTCTCGACCGAGAACCACCTCTGGAAGACTTTCTCCACGC
CGCCGGCCTGGAGGATTCTGGCGCCCAGCGACAGCTTTCCCCTCACGGTCTCGTACAGCTTTGGGCCGAGAGTCATTAAGATGTTCTTTGATGCCCCGAG
CAAACTTGTCCCCGGTCCTGCGGCCCGACTTGCCGCCGGTACGCAGGCTCGTCGAATACTTTGCATCGCCGCTGGTGAACTCGGGCTCCTCGATGCCGAT
AGCAGTGCTGCTCACTGGGATGCCAATCACATGCGCATTTCGTGCCTTCTCCATTTGCTGTTGGAACGAAGAACCGGAGACTTCTTTCTCTCGTAAGACG
ACGAGGAGGTGAAGACTTGCTCTGCTTCCTTCCTTTGCGCCTAAGTTTCCTGCCTCTGTCTGAGG
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