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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Wh_V483_all.Contig206
Contig Information
Length 1185 bp
Tissue Shoot grown under cold condition for 3days
Clones 2 Clones [Download: CSV  ,  FASTA ]
whv3n1h10    rwhv3n1h10   
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os03g0355900 [Oryza sativa (japonica cultivar-group)] >gi|108708218|gb|ABF96013.1| NAD dependent epimerase/dehydratase family protein, expressed [Oryza sativa (japonica cultivar-group)] >gi|113548609|dbj|BAF12052.1| Os03g0355900 [Oryza sativa (japonica cultivar-group)] >gi|218192848|gb|EEC75275.1| hypothetical protein OsI_11606 [Oryza sativa Indica Group]
Score 984
Evalue 1.47927e-104
Total Hit Count 500
Registered year 2003
Contig Sequence     [ Download ]
>Wh_V483_all.Contig206 
AATGGCGACGGCTCACCTCAGCCCGGCGCTCGCGGTCTCATCGTCGCGCCACCTAACCTCCAAACACGGCCAGCCGCCCATCTTCGCGCAGCCAGGCGGC
ACAGCGGTGCTGCGGTCTTGCTCGCTTCCCTTGTCCTCGAGACTTGCCGCGTCGGGTCGAGGTGGGTGGCGGCTCGCGGCGGCAGTGGAGCCCAGGACCG
CGCAGCAGGAAAAGGCCGATGCCTCCTCGAGGCTGGTCCTCGTCGTCGGCGGAACCGGCGGCGTAGGTCAATTGCTGGTAGCATCTTTGCTGAGCAGGAA
AATTAAGACAAGGCTGCTCCTAAGAAACCCTGAAAAGGCAGCGTTCTTATTTGGCAAGCAGGATGAGAGTGTTTTGCAGGTTTGTGAAGCGGACACGAGA
AATGTTGACAGTTTGAATCCAGAAATGTTTGAGGGAGTTACACATGTGGTATGTACTACTGGGACTACAGCATTTCCATCAAAACGCTGGGATGGGGATA
ACACTCCTGAACGTGTCGATTGGGATGGCGTCCGAAATTTTGTGAGTGCCATGCCACAGACGGTCAAGAGACTGGTTTTGGTGTCATCGATTGGTGTTAC
AAAATATAATGAAATACCATGGAGTATTATGAACCTCTTTGGTGTGCTTAAATACAAGAAGATGGCAGAGGACTTTGTCCGCAATTCAGGCATACCTTTC
ACGATCATCAGGCCGGGGAGATTAACAGATGGGCCCTACACTTCCTATGACCTGAACACACTTGTTAAGGCTACAGCTGGAGAAAGACGAGCAGTTGAGA
TAGGCCAAGGTGACAAGCTTGTGGGAGAAGCGAGCAGATTGGTGGTGGCAGAAGCATGTATCCAAGCTTTGGATATTGAATCTACCCAAGGAAAAATATA
CGAGATTAGTTCGGTGAAGGGCGAAGGACCTGGGAGCGACCAGGAGAAATGGAAGCAACTATTTGCAGCTGCTGAATCGAACTAGTGGCACTCTGAAGCA
CAGAGTGCAGTGCATTTTAATTTATATACACTGTAGTGGAATTCCATACAAGGGCAGTAGCGGTCCAGTACATACATAGGTGCAGAGTTGTCATTGTCGC
GGGATTTGGAAACGACTCGCAAACAATCGAGCATAGTACTATGTGCCTTATCCAAGCTATGCGCTCAGGCTTAAAAATGGAGAAT
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