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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

MUGEST2003_all.Contig24310  (registered. 2007)
Contig Information
Length 1429 bp
Clones 27 Clones [Download: TSV  ,  FASTA ]
Wh_DPA20 Seed DPA20 4
Wh_KMP Shoot grown under continuous light 3
Wh_KMV Shoot grown with continuous light after cold treatment 2
Wh_SHDr Shoot grown with dessication 1
Wh_V483 Shoot grown under cold condition for 3days 3
Wh_VABA Shoot with ABA treatment 9
Wh_VHS Shoot with heat shock treatment 4
Wh_VWD Shoot grown with dessication 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os02g0101500 [Oryza sativa (japonica cultivar-group)] >gi|41052893|dbj|BAD07805.1| putative hydroxypyruvate reductase [Oryza sativa Japonica Group] >gi|41053227|dbj|BAD08188.1| putative hydroxypyruvate reductase [Oryza sativa Japonica Group] >gi|113535120|dbj|BAF07503.1| Os02g0101500 [Oryza sativa (japonica cultivar-group)] >gi|215695322|dbj|BAG90513.1| unnamed protein product [Oryza sativa Japonica Group]
Score 1727
Evalue 0
Total Hit Count 500
Registered year 2007
Contig Sequence     [ Download ]
>MUGEST2003_all.Contig24310 
TAGTAATGCAGGGCAGGGCAAACATATAATAAATGCATAATTGATCAAAAATCTCTTGCTTGATATATATACTCATTCATTCATTCATTCATTCAGTACT
ACTACTCCATGAGGATGAGAGCATCCATACATATATACTGGGAAGGAGCTATATATGCATAGCATCTTAGCAAGTAGTAGTAGTAGTAGCAGTGATTCAT
CCATCTCTGCCTCTGCCTAAAGCTTGGAAGATGGCAGGCCGAGCTGCTTGGCATTAACGATGCTTGGGCAGGCAGGGGGCGGCGCCGCCTTCTCGTCGAG
GAAGGGCTCCACCGCGTTCGGGTTCCCCCACACCGGGTACCCCTTTATCTTACCAAGCACGTTCAGAGCAGCGAGTGTCGCCATCCCTTCACGCGTCCAC
TTGGATGCAGATGCGATGTGAGGCACGACAACGGCATTCTTCATCTCAGCCAGCCCTGGCTTCATGTAAGGCTCATCCTCAAAAACATCGAGGCCAACAC
GGAACATGGGATTCGCCCTCAGGTGCTCCACCAGTGCTACCTCGTCGATCACCGGGCCACGGCTCGCGTTCACCAGCACTGCCTCCTTCTTCATCATCGC
CAGCCGCTCTGGGTTTATCAGGTGGTACGTTGTCTTGTCCAGCACGGGGTGCAGGCTTATCACATCAGCCTCCCTGAGGACCTCCTCCATGCTGGAAGCC
CTCTTCCATGTCACGGGCTGCTCACCATTGGCTTTCAGGAACTGGCCATACGCGGTGACGAATTTCTCGAGCCGTGTGGACTGGTACAGGTCGAAGTAGA
TCAAGTTCATCTTGAACCCCTCAATCATCATCCTTGCATAAGCTGAGCCGATGCGGCCAGCTCCGATCACTCCAACAGTCTGCCCCTTGAGCAAGTTCCC
AACAAACAGGTGCGGGAGCCATCCGTCGTAGAGGCCAGCCCTCATGAATTGGTCGGCCTCAACGATCCTCCGGGCAGCCGCCACCGACAGCGATGCCGCT
AGCTCCGCCGTCGTCTCAGTAAGAACACCAGGCGTGTTGCCGATGGCGATGCCATTCCTGTTGGCAGCATCTACGTCGACGTTGTTGTAACCGACGGCCA
TGTTGCTGAAGGCTGTCCCGCCAGCGCGCTTGAGCGCAGAGAAGAGCACTTCCCCCCAGTCCTCTGTTAGCTGGCCGATGACACCATGGCAGTGATCACC
GATGAGTGCCAGTATGTCGTCGACAGAGAGGATGGTCTTCTTCTCCGTGCATATCTCGAGGCGGCAGTCGTTGTCAGTGAGGAGCTTGATCCAGCGGGTG
CCGGGCATGGAGCTTGGTGCTCACCACACGGTACTTGCCGCTGGGGTTCCACACCTCTATCGATATCGGCTTCGCCATGGCTGGAGCAGCTGCAAGGAGG
AGAAACAAGAAGCTAGATGCAAGTGGTGG
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